Co-expression analysis

Gene ID	1616098_at
Gene name	hypothetical protein LOC100244716
Homology with Arabidopsis	Similar to At5g54840: SGP1 (HF=3e-4)
Module size	6 genes
NF	0.45
%ile	67.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	83.2	0.92	1616098_at	CF514166	hypothetical protein LOC100244716	-	3e-4	At5g54840	SGP1	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.95	1611115_s_at	CB344303	hypothetical protein LOC100244716	-	3e-20	At3g21700	SGP2	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.90	1611709_at	CA816922	hypothetical protein LOC100249539	-	7e-1	At3g45870	integral membrane family protein / nodulin MtN21-related	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.90	1609526_at	CF210472	hypothetical protein LOC100261349	-	2e+0	At5g47520	AtRABA5a (Arabidopsis Rab GTPase homolog A5a)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.94	1611381_at	CF518081	hypothetical protein LOC100263252	-	3e-1	At3g12940	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.92	1621439_s_at	CB343781	hypothetical protein LOC100262404	-	6e-3	At1g71520	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
3.2	94.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
3.1	94.6	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
3.0	94.2	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
3.0	94.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.9	93.8	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.8	93.4	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
2.7	93.0	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.6	92.5	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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