Co-expression analysis

Gene ID	1616081_at
Gene name	hypothetical protein LOC100253114
Homology with Arabidopsis	Similar to At1g32930: galactosyltransferase family protein (HF=6e-81)
Module size	6 genes
NF	0.26
%ile	37.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.96	1616081_at	BQ792921	hypothetical protein LOC100253114	-	6e-81	At1g32930	galactosyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.95	1622465_s_at	BQ797465	hypothetical protein LOC100263186	-	3e-14	At3g16570	RALFL23 (ralf-like 23)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.96	1610405_at	CF405153	hypothetical protein LOC100246118	-	1e-20	At3g54950	PLA IIIA (PATATIN-LIKE PROTEIN 6)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.96	1614607_at	BQ799173	hypothetical protein LOC100247453	-	4e-8	At1g70782	CPuORF28 (Conserved peptide upstream open reading frame 28)	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.96	1606623_at	BQ797592	hypothetical protein LOC100252589	-	2e+0	At5g47310	unknown protein	O.I.	H.G.	S.X.	Please select
0.11	11.3	0.96	1610597_at	BQ800069	hypothetical protein LOC100251901	-	2e-9	At2g24100	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.5	91.9	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM436396	V. riparia (VR, PI588259) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.6	83.3	GSM287866	Green hard berry B21 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.6	83.3	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.6	83.3	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.6	83.3	GSM436406	V. riparia (VR, PI588259) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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