Co-expression analysis

Gene ID	1616075_at
Gene name	hypothetical protein LOC100265259
Homology with Arabidopsis	Similar to At3g50170: unknown protein (HF=1e+0)
Module size	7 genes
NF	0.27
%ile	38.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	84.3	0.91	1616075_at	BQ799643	hypothetical protein LOC100265259	-	1e+0	At3g50170	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.91	1609806_at	CB003844	-	-	2e+0	At5g63400	ADK1 (ADENYLATE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.92	1618968_at	CA817496	hypothetical protein LOC100248614	-	2e-22	At5g18240	MYR1 (MYb-related protein 1)	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.92	1617604_at	CF609932	hypothetical protein LOC100258898	-	1e+0	At4g21745	-	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.91	1618411_at	CF208851	hypothetical protein LOC100261275	-	4e-20	At1g32700	zinc-binding family protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.93	1615361_at	CA814618	-	-	4e-11	At2g47170	ARF1A1C	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.91	1609002_at	CB971870	-	-	6e-2	At4g24160	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.9	100.0	GSM287869	Green hard berry C3 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.5	97.5	GSM436418	V. riparia (VR, PI588259) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436379	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436383	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436380	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436403	V. riparia (VR, PI588259) LD, 15h 28 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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