Co-expression analysis

Gene ID	1616070_at
Gene name	hypothetical protein LOC100242617
Homology with Arabidopsis	Similar to At2g27600: SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1) (HF=3e-111)
Module size	8 genes
NF	0.47
%ile	70.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.82	93.9	0.99	1616070_at	BQ798090	hypothetical protein LOC100242617	-	3e-111	At2g27600	SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1)	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.99	1618114_s_at	CB915270	hypothetical protein LOC100243282	-	6e-1	At1g27610	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1622541_at	CB342787	hypothetical protein LOC100258249	-	4e-35	At5g12190	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1621842_at	CB968661	hypothetical protein LOC100256561	-	3e-33	At3g02420	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1607444_at	BQ798524	hypothetical protein LOC100247182	-	1e+0	At4g20095	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.99	1620790_at	CF515444	hypothetical protein LOC100249710	-	5e-4	At5g43960	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.99	1611228_a_at	CB922630	hypothetical protein LOC100257366	-	2e+0	At3g60260	phagocytosis and cell motility protein ELMO1-related	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.99	1611523_at	CD801109	hypothetical protein LOC100267138	-	6e-16	At3g21865	PEX22 (peroxin 22)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.1	94.6	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
3.1	94.6	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.7	93.0	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.6	92.5	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.5	91.9	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.4	91.3	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.4	91.3	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.4	91.3	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.3	90.7	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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