Co-expression analysis

Gene ID 1616054_at
Gene name
Homology with ArabidopsisSimilar to At1g29962: AGL64 (AGAMOUS-LIKE 64) (HF=9e-1)
Module size 6 genes
NF 0.10
%ile 17.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.871616054_atCF515616--9e-1At1g29962AGL64 (AGAMOUS-LIKE 64)O.I.H.G.S.X.
0.5072.70.881612118_atBQ796684--4e+0At5g05930guanylyl cyclase-related (GC1)O.I.H.G.S.X.
0.2428.70.871611432_atBM437627hypothetical protein LOC100265313-3e-5At5g54490PBP1 (PINOID-BINDING PROTEIN 1)O.I.H.G.S.X.
0.1920.90.891613617_atCB343285--1e+0At2g42670unknown proteinO.I.H.G.S.X.
0.066.80.881609871_atCK138134.1--1e+0At4g40045unknown proteinO.I.H.G.S.X.
0.023.20.871614773_atCA809316--4e+0At3g08600unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.098.0GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.997.9GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.797.7GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.497.3GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.297.1GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
4.196.9GSM287879Green hard berry C19 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.395.2GSM287887Green soft berry C23 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.094.2GSM287900Red soft berry C15 from plant 1 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.094.2GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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