Co-expression analysis

Gene ID	1616050_at
Gene name	hypothetical protein LOC100244878
Homology with Arabidopsis	Similar to At5g06280: unknown protein (HF=9e+0)
Module size	6 genes
NF	0.49
%ile	72.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.97	1616050_at	CF373308	hypothetical protein LOC100244878	-	9e+0	At5g06280	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.97	1622787_at	CF607318	hypothetical protein LOC100244878	-	4e-19	At5g62500	ATEB1B (END BINDING PROTEIN 1B)	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.96	1607622_at	CF404670	hypothetical protein LOC100265082	-	8e-17	At2g17370	HMG2 (3-HYDROXY-3-METHYLGLUTARYL-COA REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1609334_at	BM437062	hypothetical protein LOC100246202	-	2e-30	At1g63160	replication factor C 40 kDa, putative	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.97	1618094_at	CB340258	hypothetical protein LOC100261032	-	3e-27	At4g33140	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.97	1611882_at	CF512921	hypothetical protein LOC100268072	-	7e-13	At5g62000	ARF2 (AUXIN RESPONSE FACTOR 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.1	99.5	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
5.2	98.2	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
4.5	97.5	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
4.0	96.7	GSM147672	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	1
3.1	94.6	GSM436389	V. riparia (VR, PI588259) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.9	93.8	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.7	93.0	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
2.4	91.3	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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