Co-expression analysis

Gene ID 1616025_at
Gene name hypothetical protein LOC100257715
Homology with ArabidopsisSimilar to At1g49540: nucleotide binding (HF=2e-21)
Module size 6 genes
NF 0.51
%ile 75.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.80.981616025_atCF607089hypothetical protein LOC100257715-2e-21At1g49540nucleotide bindingO.I.H.G.S.X.
0.6183.20.981619732_atCF517983hypothetical protein LOC100267623-5e-15At5g53000TAP46 (2A phosphatase associated protein of 46 kD)O.I.H.G.S.X.
0.6183.20.981611994_a_atCF214487hypothetical protein LOC100260925-7e-8At1g32230RCD1 (RADICAL-INDUCED CELL DEATH1)O.I.H.G.S.X.
0.5072.70.971622000_s_atCF604800hypothetical protein LOC100242169-1e+0At3g27329-O.I.H.G.S.X.
0.4666.50.981611784_atCB971421hypothetical protein LOC100256712-2e-37At3g07300eukaryotic translation initiation factor 2B family protein / eIF-2B family proteinO.I.H.G.S.X.
0.2937.70.981621533_atCF514195hypothetical protein LOC100248579-5e-45At4g01810protein transport protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.893.4GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.289.9GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.289.9GSM299452B_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.189.1GSM299451B_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM299455C_ni_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.987.2GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19Link to GEO
1.987.2GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
1.987.2GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
1.886.0GSM147700Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation29Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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