Co-expression analysis

Gene ID 1616023_at
Gene name hypothetical protein LOC100252512
Homology with ArabidopsisSimilar to At1g50140: ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding (HF=1e-38)
Module size 6 genes
NF 0.52
%ile 77.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8093.60.981616023_atCB979152hypothetical protein LOC100252512-1e-38At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.5779.80.981615727_atCF205417.1hypothetical protein LOC100261981-9e-2At4g31470pathogenesis-related protein, putativeO.I.H.G.S.X.
0.5577.30.981607312_atCF511987hypothetical protein LOC100249902-5e+0At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.
0.4464.10.981619028_atCF205704.1hypothetical protein LOC100248919-3e-26At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.4464.10.981608770_atCF211789--6e-21At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.2734.00.981615943_atCB971749hypothetical protein LOC100266273-5e-14At1g51980mitochondrial processing peptidase alpha subunit, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.399.4GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.397.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
4.096.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.495.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.294.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.194.6GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
3.194.6GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.893.4GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.793.0GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.491.3GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.13693.1.A1_at, orthologous to the query gene, 1616023_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5267.3Zm.13693.1.A1_atAt1g50140--6e-54At4g02480AAA-type ATPase family proteinO.I.H.G.S.X.
0.6785.8ZmAffx.58.1.A1_atAt1g50140--3e+0At4g04840methionine sulfoxide reductase domain-containing protein / SeIR domain-containing proteinO.I.H.G.S.X.
0.3131.6Zm.1699.1.S1_atAt1g50140--5e-45At3g20290ATEHD1 (EPS15 HOMOLOGY DOMAIN 1)O.I.H.G.S.X.
0.158.6ZmAffx.46.1.A1_atAt1g50140hypothetical protein LOC100273468-3e+0At5g62260DNA bindingO.I.H.G.S.X.
0.115.3Zm.13062.1.A1_atAt1g50140Hypothetical protein LOC100193834-2e-1At4g33750-O.I.H.G.S.X.
0.115.3Zm.6172.1.S1_atAt1g50140protein disulfide isomerase-2e-9At1g07960ATPDIL5-1 (PDI-like 5-1)O.I.H.G.S.X.
0.072.9Zm.5396.1.S1_atAt1g50140Hypothetical protein LOC100216913-8e-5At1g53645hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.

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