Co-expression analysis

Gene ID 1616023_at
Gene name hypothetical protein LOC100252512
Homology with ArabidopsisSimilar to At1g50140: ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding (HF=1e-38)
Module size 6 genes
NF 0.52
%ile 77.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8093.60.981616023_atCB979152hypothetical protein LOC100252512-1e-38At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.5779.80.981615727_atCF205417.1hypothetical protein LOC100261981-9e-2At4g31470pathogenesis-related protein, putativeO.I.H.G.S.X.
0.5577.30.981607312_atCF511987hypothetical protein LOC100249902-5e+0At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.
0.4464.10.981619028_atCF205704.1hypothetical protein LOC100248919-3e-26At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.4464.10.981608770_atCF211789--6e-21At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.2734.00.981615943_atCB971749hypothetical protein LOC100266273-5e-14At1g51980mitochondrial processing peptidase alpha subunit, putativeO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.399.4GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.397.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
4.096.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.495.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.294.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.194.6GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
3.194.6GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.893.4GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.793.0GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.491.3GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig9080_s_at, orthologous to the query gene, 1616023_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7891.2Contig9080_s_atAt1g50140--5e-14At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.4255.2Contig416_x_atAt1g50140--5e-29At4g24190SHD (SHEPHERD)O.I.H.G.S.X.
0.4053.1Contig13788_atAt1g50140--3e+0At3g18215unknown proteinO.I.H.G.S.X.
0.3747.9Contig12594_atAt1g50140--3e+0At5g11990proline-rich family proteinO.I.H.G.S.X.
0.3240.3Contig4475_atAt1g50140--1e-1At1g71840transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3138.6Contig5749_atAt1g50140--6e-16At2g25310carbohydrate bindingO.I.H.G.S.X.
0.2935.5Contig6890_atAt1g50140--4e+0At5g34581hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2732.1Contig9332_atAt1g50140--6e+0At3g01470ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)O.I.H.G.S.X.
0.2326.1Contig8943_atAt1g50140--1e-6At1g7599026S proteasome regulatory subunit S3, putative (RPN3)O.I.H.G.S.X.
0.2326.1rbags1e22_s_atAt1g50140--3e-1At3g56360unknown proteinO.I.H.G.S.X.
0.2122.6Contig9785_atAt1g50140--9e-4At4g25620hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1818.2Contig10818_atAt1g50140--1e-2At1g47970unknown proteinO.I.H.G.S.X.

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