Co-expression analysis

Gene ID 1616023_at
Gene name hypothetical protein LOC100252512
Homology with ArabidopsisSimilar to At1g50140: ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding (HF=1e-38)
Module size 6 genes
NF 0.52
%ile 77.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8093.60.981616023_atCB979152hypothetical protein LOC100252512-1e-38At1g50140ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingO.I.H.G.S.X.
0.5779.80.981615727_atCF205417.1hypothetical protein LOC100261981-9e-2At4g31470pathogenesis-related protein, putativeO.I.H.G.S.X.
0.5577.30.981607312_atCF511987hypothetical protein LOC100249902-5e+0At3g12370ribosomal protein L10 family proteinO.I.H.G.S.X.
0.4464.10.981619028_atCF205704.1hypothetical protein LOC100248919-3e-26At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.4464.10.981608770_atCF211789--6e-21At3g60620phosphatidate cytidylyltransferase family proteinO.I.H.G.S.X.
0.2734.00.981615943_atCB971749hypothetical protein LOC100266273-5e-14At1g51980mitochondrial processing peptidase alpha subunit, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.399.4GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
4.397.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
4.096.7GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.495.5GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.294.9GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
3.194.6GSM147741Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation70Link to GEO
3.194.6GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.893.4GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.793.0GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.491.3GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At1g50140, orthologous to the query gene, 1616023_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.2420.7At1g50140841436ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:biological_process unknown;C:cellular_component unknown;BOMFPAVO.I.H.G.S.X.
0.6075.7At5g08500830749transmembrane CLPTM1 family proteinF:unknown;P:biological_process unknown;C:unknown;MOFPO.I.H.G.S.X.
0.5065.3At5g13310831172unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;MOBFPO.I.H.G.S.X.
0.4050.8At5g12290831104DGS1 (DGD1 SUPPRESSOR 1)Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.O.I.H.G.S.X.
0.3541.6At1g72740843606DNA-binding family protein / histone H1/H5 family proteinF:transcription factor activity;P:nucleosome assembly, regulation of transcription;C:nucleus;PMFOO.I.H.G.S.X.

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