Co-expression analysis

Gene ID	1616007_at
Gene name	hypothetical protein LOC100264254
Homology with Arabidopsis	Similar to At1g19300: PARVUS (PARVUS) (HF=3e-15)
Module size	6 genes
NF	0.28
%ile	40.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.94	1616007_at	CB002013	hypothetical protein LOC100264254	-	3e-15	At1g19300	PARVUS (PARVUS)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.96	1614089_at	CF511077	hypothetical protein LOC100252201	-	1e+0	At3g14260	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.97	1610598_at	CA818645	-	-	4e+0	At5g20060	phospholipase/carboxylesterase family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.95	1617942_at	CF513248	-	-	1e+0	At4g19830	immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.95	1607952_at	CF372631	hypothetical protein LOC100250523	-	3e-8	At1g28440	HSL1 (HAESA-Like 1)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.96	1610478_at	CD717598	hypothetical protein LOC100247635	-	1e+0	At4g23885	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.4	91.3	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.2	89.9	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.1	89.1	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
1.9	87.2	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
1.8	86.0	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
1.7	84.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.7	84.7	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.6	83.3	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
1.6	83.3	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.6	83.3	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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