Co-expression analysis

Gene ID	1615908_at
Gene name	hypothetical protein LOC100249757
Homology with Arabidopsis	Similar to At3g02530: chaperonin, putative (HF=9e-88)
Module size	8 genes
NF	0.31
%ile	44.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.57	79.8	0.97	1615908_at	CF214075	hypothetical protein LOC100249757	-	9e-88	At3g02530	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.98	1609441_at	CB971243	hypothetical protein LOC100262569	-	7e-30	At2g44680	CKB4 (CASEIN KINASE II BETA SUBUNIT 4)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.97	1608844_at	CB969819	hypothetical protein LOC100266260	-	1e+0	At2g31180	MYB14 (MYB DOMAIN PROTEIN 14)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1620934_at	CA814719	hypothetical protein LOC100244635	-	1e-1	At2g40780	RNA binding / translation initiation factor	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.97	1619732_at	CF517983	hypothetical protein LOC100267623	-	5e-15	At5g53000	TAP46 (2A phosphatase associated protein of 46 kD)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1617936_at	BQ797736	similar to 26S proteasome subunit RPN5b	-	3e-23	At5g64760	RPN5B (REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	AFFX-Vvi-actin-5_at		actin 1	-			-	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.97	1612651_at	CB347748	hypothetical protein LOC100254350	-	1e-28	At1g79940	ATERDJ2A	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.5	98.4	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
4.9	97.9	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.6	96.0	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
3.5	95.7	GSM147738	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	67
3.5	95.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
3.2	94.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
3.1	94.6	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.9	93.8	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.9	93.8	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.8	93.4	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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