Co-expression analysis

Gene ID	1615876_at
Gene name	hypothetical protein LOC100248980
Homology with Arabidopsis	Similar to At4g37210: tetratricopeptide repeat (TPR)-containing protein (HF=4e-12)
Module size	6 genes
NF	0.54
%ile	80.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1615876_at	CF513558	hypothetical protein LOC100248980	-	4e-12	At4g37210	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1607206_at	CD013646	hypothetical protein LOC100246478	-	3e-11	At1g49400	emb1129 (embryo defective 1129)	O.I.	H.G.	S.X.	Please select
0.71	89.5	0.98	1616462_at	CF215132	hypothetical protein LOC100252529	-	2e+1	At5g57860	ubiquitin family protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1607257_at	CB342664	hypothetical protein LOC100265075	-	1e-22	At1g76510	ARID/BRIGHT DNA-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.99	1609777_at	CF519086	hypothetical protein LOC100257098	-	5e+0	At5g44973	-	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.99	1614667_at	CB976778	hypothetical protein LOC100243706	-	4e-6	At2g44200	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.1	89.1	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
2.1	89.1	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.0	88.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
1.9	87.2	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
1.9	87.2	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
1.8	86.0	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.8	86.0	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
1.7	84.7	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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