Co-expression analysis

Gene ID 1615876_at
Gene name hypothetical protein LOC100248980
Homology with ArabidopsisSimilar to At4g37210: tetratricopeptide repeat (TPR)-containing protein (HF=4e-12)
Module size 6 genes
NF 0.54
%ile 80.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.981615876_atCF513558hypothetical protein LOC100248980-4e-12At4g37210tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.
0.8093.60.981607206_atCD013646hypothetical protein LOC100246478-3e-11At1g49400emb1129 (embryo defective 1129)O.I.H.G.S.X.
0.7189.50.981616462_atCF215132hypothetical protein LOC100252529-2e+1At5g57860ubiquitin family proteinO.I.H.G.S.X.
0.6787.90.981607257_atCB342664hypothetical protein LOC100265075-1e-22At1g76510ARID/BRIGHT DNA-binding domain-containing proteinO.I.H.G.S.X.
0.3345.70.991609777_atCF519086hypothetical protein LOC100257098-5e+0At5g44973-O.I.H.G.S.X.
0.1414.40.991614667_atCB976778hypothetical protein LOC100243706-4e-6At2g44200unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.189.1GSM147731Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation60Link to GEO
2.189.1GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.088.2GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
1.987.2GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
1.987.2GSM147724Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation53Link to GEO
1.886.0GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
1.886.0GSM147718Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation47Link to GEO
1.784.7GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM147720Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation49Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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