Co-expression analysis

Gene ID	1615867_at
Gene name
Homology with Arabidopsis	Similar to At4g32551: LUG (LEUNIG) (HF=7e-5)
Module size	9 genes
NF	0.52
%ile	78.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.92	1615867_at	CF513408	-	-	7e-5	At4g32551	LUG (LEUNIG)	O.I.	H.G.	S.X.	Please select
0.75	91.3	0.96	1622020_s_at	BQ794212	hypothetical protein LOC100261607	-	1e-8	At4g20260	DREPP plasma membrane polypeptide family protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.94	1613088_at	CB975785	hypothetical protein LOC100262569	-	5e-1	At5g24660	LSU2 (RESPONSE TO LOW SULFUR 2)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.96	1607534_at	CB345110	hypothetical protein LOC100248163	-	3e-11	At2g38460	ATIREG1 (IRON-REGULATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.95	1622431_at	CF371864	hypothetical protein LOC100264392	-	8e-1	At3g06895	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.94	1616564_at	CB979976	-	-	4e-42	At3g26618	ERF1-3 (eukaryotic release factor 1-3)	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.96	1615750_at	CD800994	hypothetical protein LOC100261431	-	2e+0	At5g58787	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.96	1614761_at	CD797278	hypothetical protein LOC100266857	-	4e+0	At1g69920	ATGSTU12 (GLUTATHIONE S-TRANSFERASE TAU 12)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.94	1608615_at	BQ799732	hypothetical protein LOC100255091	-	2e-33	At3g61440	CYSC1 (CYSTEINE SYNTHASE C1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.6	92.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.3	90.7	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.3	90.7	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.3	90.7	GSM436409	V. riparia (VR, PI588259) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
2.2	89.9	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.2	89.9	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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