Co-expression analysis

Gene ID 1615850_s_at
Gene name hypothetical protein LOC100258165
Homology with ArabidopsisSimilar to At5g05110: cysteine protease inhibitor, putative / cystatin, putative (HF=6e+0)
Module size 6 genes
NF 0.36
%ile 52.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971615850_s_atBQ796206hypothetical protein LOC100258165-6e+0At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.5072.70.981610020_atBQ799829hypothetical protein LOC100260445-2e-114At2g27450NLP1 (NITRILASE-LIKE PROTEIN 1)O.I.H.G.S.X.
0.4057.70.971618957_atCF603287hypothetical protein LOC100263857-6e-27At3g46200aTNUDT9 (Arabidopsis thaliana Nudix hydrolase homolog 9)O.I.H.G.S.X.
0.4057.70.981621917_atCF208474hypothetical protein LOC100244091-1e-20At3g03420Ku70-binding family proteinO.I.H.G.S.X.
0.2937.70.971619232_atCA817187hypothetical protein LOC100248696-6e-6At3g06420ATG8H (autophagy 8h)O.I.H.G.S.X.
0.1414.40.971610077_atCB919847hypothetical protein LOC100264401-4e-38At1g77710-O.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5072.70.961612535_s_atCB348535hypothetical protein LOC100246597-4e-3At3g55040GSTL2O.I.H.G.S.X.
0.5072.70.971618050_s_atBQ792637hypothetical protein LOC100259485-1e-2At3g01170structural constituent of ribosomeO.I.H.G.S.X.
0.4666.50.961614508_atCB008806hypothetical protein LOC100257568-1e-10At1g52600signal peptidase, putativeO.I.H.G.S.X.
0.4464.10.971619505_a_atCB981292hypothetical protein LOC100250945-6e-25At2g01350QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE)O.I.H.G.S.X.
0.4464.10.971619462_atCB341985hypothetical protein LOC100251802-6e-21At4g08790nitrilase, putativeO.I.H.G.S.X.
0.4361.50.951607884_atCF214467--3e-10At5g49015Expressed proteinO.I.H.G.S.X.
0.4361.50.971621870_atCF414005hypothetical protein LOC100245239-9e-8At3g20510unknown proteinO.I.H.G.S.X.
0.3650.70.941618640_atCB912272hypothetical protein LOC100263256-5e+0Atcg01310-O.I.H.G.S.X.
0.3650.70.951612505_atBQ800168--2e-5At3g62210EDA32 (embryo sac development arrest 32)O.I.H.G.S.X.
0.3650.70.981606757_atCF215952hypothetical protein LOC100262374-4e+0At3g43950phosphotransferase, alcohol group as acceptorO.I.H.G.S.X.
0.3548.50.951614428_atBQ799174hypothetical protein LOC100266723-4e-135At4g23100GSH1 (GLUTAMATE-CYSTEINE LIGASE)O.I.H.G.S.X.
0.3345.70.961609536_atCB974631hypothetical protein LOC100247006-2e-2At5g03460unknown proteinO.I.H.G.S.X.
0.3141.30.971611001_atCF204537.1--7e-12At2g26600glycosyl hydrolase family 17 proteinO.I.H.G.S.X.
0.3141.30.971621910_a_atCB340746--1e-134At5g14670ATARFA1B (ADP-ribosylation factor A1B)O.I.H.G.S.X.
0.3039.40.961610099_atBQ794282hypothetical protein LOC100250035-5e-6At5g50000protein kinase, putativeO.I.H.G.S.X.
0.2937.70.961616496_atCB975515--3e-5At4g23710VAG2O.I.H.G.S.X.
0.2937.70.961619912_atCB981956hypothetical protein LOC100248672 /// hypothetical protein LOC100258262-6e-91At1g29310P-P-bond-hydrolysis-driven protein transmembrane transporterO.I.H.G.S.X.
0.2937.70.971609431_atCB347616hypothetical protein LOC100244166-3e-4At5g18790ribosomal protein L33 family proteinO.I.H.G.S.X.
0.2937.70.971620251_atCD009853hypothetical protein LOC100249202-3e-2At2g22080unknown proteinO.I.H.G.S.X.
0.2734.00.951613292_s_atCD800861similar to putative protein-3e+0At2g27410unknown proteinO.I.H.G.S.X.
0.2734.00.971617472_atCB970516hypothetical protein LOC100262721-1e+0At2g10930unknown proteinO.I.H.G.S.X.
0.2632.00.941613127_atCF604632hypothetical protein LOC100252080-1e-3At5g50260cysteine proteinase, putativeO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM147676Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation5Link to GEO
2.893.4GSM147695Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation24Link to GEO
2.692.5GSM147677Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation6Link to GEO
2.491.3GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.289.9GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.189.1GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147694Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation23Link to GEO
2.088.2GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.088.2GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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