Co-expression analysis

Gene ID 1615850_s_at
Gene name hypothetical protein LOC100258165
Homology with ArabidopsisSimilar to At5g05110: cysteine protease inhibitor, putative / cystatin, putative (HF=6e+0)
Module size 6 genes
NF 0.36
%ile 52.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971615850_s_atBQ796206hypothetical protein LOC100258165-6e+0At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.5072.70.981610020_atBQ799829hypothetical protein LOC100260445-2e-114At2g27450NLP1 (NITRILASE-LIKE PROTEIN 1)O.I.H.G.S.X.
0.4057.70.971618957_atCF603287hypothetical protein LOC100263857-6e-27At3g46200aTNUDT9 (Arabidopsis thaliana Nudix hydrolase homolog 9)O.I.H.G.S.X.
0.4057.70.981621917_atCF208474hypothetical protein LOC100244091-1e-20At3g03420Ku70-binding family proteinO.I.H.G.S.X.
0.2937.70.971619232_atCA817187hypothetical protein LOC100248696-6e-6At3g06420ATG8H (autophagy 8h)O.I.H.G.S.X.
0.1414.40.971610077_atCB919847hypothetical protein LOC100264401-4e-38At1g77710-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM147676Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation5Link to GEO
2.893.4GSM147695Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation24Link to GEO
2.692.5GSM147677Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation6Link to GEO
2.491.3GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.289.9GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.189.1GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147694Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation23Link to GEO
2.088.2GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.088.2GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19Link to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.216470.1.S1_s_at, orthologous to the query gene, 1615850_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6791.1PtpAffx.216470.1.S1_s_atAt5g05110hypothetical protein-6e-24At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.5683.9PtpAffx.145335.1.A1_atAt5g05110hypothetical protein-4e+0At4g15620integral membrane family proteinO.I.H.G.S.X.
0.5582.2PtpAffx.1941.1.S1_a_atAt5g05110--6e-1At3g24800PRT1 (PROTEOLYSIS 1)O.I.H.G.S.X.
0.4369.7Ptp.4563.1.S1_atAt5g05110hypothetical protein-2e-19At4g39100SHL1 (short life)O.I.H.G.S.X.
0.3863.7PtpAffx.117819.1.S1_atAt5g05110hypothetical protein-2e-1At4g02800unknown proteinO.I.H.G.S.X.
0.2543.6PtpAffx.56274.1.S1_atAt5g05110hypothetical protein-1e+0At3g4459060S acidic ribosomal protein P2 (RPP2D)O.I.H.G.S.X.
0.0812.9PtpAffx.200899.1.S1_atAt5g05110hypothetical protein-2e-3At4g14590emb2739 (embryo defective 2739)O.I.H.G.S.X.
0.058.3PtpAffx.151516.1.A1_atAt5g05110hypothetical protein-2e-30At3g13530MAPKKK7O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Zea_mays



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