Co-expression analysis

Gene ID 1615850_s_at
Gene name hypothetical protein LOC100258165
Homology with ArabidopsisSimilar to At5g05110: cysteine protease inhibitor, putative / cystatin, putative (HF=6e+0)
Module size 6 genes
NF 0.36
%ile 52.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.971615850_s_atBQ796206hypothetical protein LOC100258165-6e+0At5g05110cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.5072.70.981610020_atBQ799829hypothetical protein LOC100260445-2e-114At2g27450NLP1 (NITRILASE-LIKE PROTEIN 1)O.I.H.G.S.X.
0.4057.70.971618957_atCF603287hypothetical protein LOC100263857-6e-27At3g46200aTNUDT9 (Arabidopsis thaliana Nudix hydrolase homolog 9)O.I.H.G.S.X.
0.4057.70.981621917_atCF208474hypothetical protein LOC100244091-1e-20At3g03420Ku70-binding family proteinO.I.H.G.S.X.
0.2937.70.971619232_atCA817187hypothetical protein LOC100248696-6e-6At3g06420ATG8H (autophagy 8h)O.I.H.G.S.X.
0.1414.40.971610077_atCB919847hypothetical protein LOC100264401-4e-38At1g77710-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.294.9GSM147676Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation5Link to GEO
2.893.4GSM147695Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation24Link to GEO
2.692.5GSM147677Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation6Link to GEO
2.491.3GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO
2.289.9GSM436389V. riparia (VR, PI588259) LD, 15h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
2.189.1GSM322366genotype: Chardonnay - disease type: Healthy - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM147694Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation23Link to GEO
2.088.2GSM147719Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation48Link to GEO
2.088.2GSM147690Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation19Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os01g0270100, orthologous to the query gene, 1615850_s_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8696.4Os01g0270100At5g05110-Cysteine proteinase inhibitor2e-3At3g12490cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.3644.0Os03g0861800At5g05110-Cyclin-like F-box domain containing protein1e-2At5g66540-O.I.H.G.S.X.
0.3541.7Os04g0508300At5g05110-Glutaredoxin5e-31Atcg00680-O.I.H.G.S.X.
0.3134.5Os02g0556600At5g05110-Sulfated surface glycoprotein 185 precursor (SSG185)7e-5At1g35470SPla/RYanodine receptor (SPRY) domain-containing proteinO.I.H.G.S.X.
0.149.3Os08g0191600At5g05110-Autophagy 8e9e-33At1g62040ATG8C (autophagy 8c)O.I.H.G.S.X.
0.138.2Os12g0632000At5g05110-Glycine-rich RNA-binding protein GRP1A8e-1At5g40970unknown proteinO.I.H.G.S.X.
0.094.9Os06g0714500At5g05110--7e-17At4g27680MSP1 protein, putative / intramitochondrial sorting protein, putativeO.I.H.G.S.X.
0.084.2Os06g0152200At5g05110-Salt-tolerance protein7e-1At5g45390CLPP4 (CLP PROTEASE P4)O.I.H.G.S.X.
0.063.0Os03g0137400At5g05110-Conserved hypothetical protein4e-10At4g35870-O.I.H.G.S.X.
0.052.5Os09g0512900At5g05110-Conserved hypothetical protein7e-19At5g11680unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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