Co-expression analysis

Gene ID	1615811_a_at
Gene name	hypothetical protein LOC100240940
Homology with Arabidopsis	Similar to At3g16630: KINESIN-13A (HF=4e-86)
Module size	14 genes
NF	0.28
%ile	39.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.81	93.7	0.98	1615811_a_at	CF214981	hypothetical protein LOC100240940	-	4e-86	At3g16630	KINESIN-13A	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.98	1607383_at	CF514958	similar to Os02g0672700	-	2e+0	At5g42410	auxin-responsive family protein	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.99	1620213_at	CB981229	hypothetical protein LOC100252268	-	5e-1	At1g13600	AtbZIP58 (Arabidopsis thaliana basic leucine-zipper 58)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1615105_s_at	CF568901	hypothetical protein LOC100256979	-	0	At1g07930	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1614241_at	CF209157	hypothetical protein LOC100255909	-	7e-6	At1g14685	BPC2 (BASIC PENTACYSTEINE 2)	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1610877_at	CF517648	hypothetical protein LOC100241489	-	5e-10	At3g02760	ATP binding / aminoacyl-tRNA ligase/ histidine-tRNA ligase/ nucleotide binding	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.99	1616450_at	BQ797532	hypothetical protein LOC100264578	-	3e-23	At1g48790	mov34 family protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.98	1607275_at	CF210833	hypothetical protein LOC100261812	-	7e-13	At3g15980	coatomer protein complex, subunit beta 2 (beta prime), putative	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.97	1620627_at	CF214379	hypothetical protein LOC100259195	-	1e-22	At1g20110	zinc finger (FYVE type) family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1612204_at	CB921241	hypothetical protein LOC100256288	-	1e-47	At3g03110	XPO1B	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.98	1619066_s_at	CD801269	hypothetical protein LOC100243665	-	7e-2	At2g17630	phosphoserine aminotransferase, putative	O.I.	H.G.	S.X.	Please select
0.19	20.9	0.98	1621155_at	BQ794745	hypothetical protein LOC100248478	-	8e-34	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.99	1610114_at	CD003699	similar to SPla/RYanodine receptor (SPRY) domain-containing protein	-	8e+0	At5g51710	KEA5	O.I.	H.G.	S.X.	Please select
0.12	12.1	0.98	1613387_at	CB971364	hypothetical protein LOC100251150	-	1e-25	At5g01460	LMBR1 integral membrane family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.0	88.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.0	88.2	GSM147719	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	48
2.0	88.2	GSM287896	Pink soft berry C27 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
1.8	86.0	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.8	86.0	GSM322364	genotype: Chardonnay - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.7	84.7	GSM436425	V. riparia (VR, PI588259) SD, 13h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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