Co-expression analysis

Gene ID 1615742_at
Gene name 5-enolpyruvylshikimate-3-phosphate synthase
Homology with ArabidopsisSimilar to At2g45300: 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase (HF=8e-121)
Module size 6 genes
NF 0.21
%ile 29.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5375.20.951615742_atCB9706705-enolpyruvylshikimate-3-phosphate synthase-8e-121At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseO.I.H.G.S.X.
0.6787.90.961620412_atCF511306hypothetical protein LOC100247288-6e-10At1g36160ACC1 (ACETYL-COENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.5577.30.961614440_atBQ7969223-deoxy-D-arabino-heptulosonate 7-phosphate synthase-2e-53At4g39980DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1)O.I.H.G.S.X.
0.3345.70.961610068_atCD711769hypothetical protein LOC100252154-2e-19At2g36670aspartyl protease family proteinO.I.H.G.S.X.
0.1515.60.961618421_atCF604028hypothetical protein LOC100252493-6e-6At3g57560aspartate/glutamate/uridylate kinase family proteinO.I.H.G.S.X.
0.045.20.961611681_atCF513131hypothetical protein LOC100241604-4e+0At5g39360EDL2 (EID1-like 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.697.6GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.796.2GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.495.5GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.294.9GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
3.094.2GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
2.993.8GSM287882Green soft berry A21 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.993.8GSM147692Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation21Link to GEO
2.993.8GSM147699Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation28Link to GEO
2.793.0GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO
2.692.5GSM147687Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation16Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.98.1.S1_at, orthologous to the query gene, 1615742_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9799.9Zm.98.1.S1_atAt2g453003-phosphoshikimate 1-carboxyvinyltransferase-2e-48At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeO.I.H.G.S.X.
0.6279.8ZmAffx.20.1.S1_atAt2g45300--3e+0At4g02550unknown proteinO.I.H.G.S.X.
0.5267.3Zm.1128.1.S1_atAt2g45300--3e+0At1g27130ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)O.I.H.G.S.X.
0.5166.4Zm.3180.1.A1_atAt2g45300--7e-1At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.5166.4ZmAffx.1194.1.A1_atAt2g45300--4e+0At5g59990-O.I.H.G.S.X.
0.4961.9Zm.18815.1.A1_atAt2g45300hypothetical protein LOC100191886-2e+0At4g12530protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.4658.4Zm.6284.1.S1_atAt2g45300hypothetical protein LOC100194329-1e+0At5g22035O.I.H.G.S.X.
0.4658.4ZmAffx.228.1.A1_atAt2g45300--5e-2At5g59000zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4658.4Zm.15550.2.A1_atAt2g45300protein phosphatase 2C-7e-13At5g02760protein phosphatase 2C family protein / PP2C family proteinO.I.H.G.S.X.
0.4455.7ZmAffx.742.1.S1_atAt2g45300--3e+0At1g10650protein binding / zinc ion bindingO.I.H.G.S.X.
0.4455.7Zm.12306.1.S1_atAt2g45300hypothetical protein LOC100216558-5e-2At5g19680leucine-rich repeat family proteinO.I.H.G.S.X.
0.4352.8ZmAffx.1083.1.A1_atAt2g45300--1e+0At1g59830PP2A-1O.I.H.G.S.X.
0.4352.8Zm.6592.1.A1_atAt2g45300kelch motif family protein-2e-2At1g51540-O.I.H.G.S.X.
0.4149.7ZmAffx.607.1.A1_atAt2g45300--3e+0At1g78150unknown proteinO.I.H.G.S.X.
0.3844.2Zm.2368.1.S1_atAt2g45300plastidic phosphate translocator-like protein1-4e-21At4g32390phosphate translocator-relatedO.I.H.G.S.X.
0.3844.2Zm.18127.1.S1_atAt2g45300membrin 11-1e-8At5g50440MEMB12 (MEMBRIN 12)O.I.H.G.S.X.
0.3844.2Zm.7327.1.A1_atAt2g45300nuclear matrix protein 1-4e-2At5g17620-O.I.H.G.S.X.
0.3641.3Zm.12679.1.S1_atAt2g45300hypothetical protein LOC100217156-7e-1At5g42510disease resistance-responsive family proteinO.I.H.G.S.X.
0.3538.9Zm.11779.1.A1_atAt2g45300hypothetical protein LOC100217298-3e+0At3g47800aldose 1-epimerase family proteinO.I.H.G.S.X.
0.3538.9Zm.6719.1.A1_atAt2g45300--8e-1At4g01960unknown proteinO.I.H.G.S.X.
0.3437.2Zm.583.1.S1_atAt2g45300tangled1-3e-1At1g21350antioxidant/ oxidoreductaseO.I.H.G.S.X.
0.3437.2ZmAffx.1019.1.S1_atAt2g45300--3e+0At2g29070ubiquitin fusion degradation UFD1 family proteinO.I.H.G.S.X.
0.3336.0ZmAffx.186.1.A1_atAt2g45300hypothetical protein LOC100217123-6e-5At5g19690STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)O.I.H.G.S.X.
0.3233.4Zm.6559.1.A1_atAt2g45300--3e-14At5g26830threonyl-tRNA synthetase / threonine--tRNA ligase (THRRS)O.I.H.G.S.X.
0.3233.4Zm.13412.1.S1_x_atAt2g45300--2e-7At2g36230APG10 (ALBINO AND PALE GREEN 10)O.I.H.G.S.X.
0.3131.6Zm.4299.1.S1_atAt2g45300hypothetical protein LOC100279924-5e-14At3g21630CERK1 (CHITIN ELICITOR RECEPTOR KINASE 1)O.I.H.G.S.X.
0.2928.1Zm.15499.1.S1_atAt2g45300--3e-17At1g10940SNRK2.4 (SNF1-RELATED PROTEIN KINASE 2.4)O.I.H.G.S.X.
0.2928.1Zm.17513.1.A1_atAt2g45300MFP1 attachment factor 1-5e+0At1g22840CYTC-1 (CYTOCHROME C-1)O.I.H.G.S.X.
0.2928.1Zm.19022.1.S1_atAt2g45300hypothetical protein LOC100273481-7e-1At5g06570hydrolaseO.I.H.G.S.X.
0.2622.7Zm.6376.1.A1_atAt2g45300--2e-1At1g68560XYL1 (ALPHA-XYLOSIDASE 1)O.I.H.G.S.X.
0.2521.3Zm.878.2.S1_atAt2g4530060S ribosomal protein L35-4e-19At5g0261060S ribosomal protein L35 (RPL35D)O.I.H.G.S.X.
0.2521.3Zm.1693.1.A1_atAt2g45300--4e-3At3g55670-O.I.H.G.S.X.
0.2419.8Zm.14014.1.A1_atAt2g45300NADH-ubiquinone oxidoreductase 23 kDa subunit-2e-62At1g79010NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY)O.I.H.G.S.X.
0.1912.8Zm.13449.1.A1_atAt2g45300hypothetical protein LOC100279539-5e+0At5g07600oleosin / glycine-rich proteinO.I.H.G.S.X.
0.1710.6Zm.10554.1.A1_atAt2g45300--3e-10At2g44090-O.I.H.G.S.X.
0.169.4Zm.13054.1.A1_atAt2g45300hypothetical protein LOC100273794-9e-6At2g43080AT-P4H-1 (A. THALIANA P4H ISOFORM 1)O.I.H.G.S.X.
0.147.7Zm.9215.1.A1_atAt2g45300--2e-1At1g29860WRKY71O.I.H.G.S.X.
0.147.7ZmAffx.118.1.S1_atAt2g45300--8e-1At5g59470PQ-loop repeat family protein / transmembrane family proteinO.I.H.G.S.X.
0.147.7ZmAffx.509.1.A1_atAt2g45300--3e+0At2g17740DC1 domain-containing proteinO.I.H.G.S.X.
0.094.0ZmAffx.261.1.S1_atAt2g45300--8e-1At1g03440leucine-rich repeat family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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