| Gene ID | 1615742_at |
| Gene name | 5-enolpyruvylshikimate-3-phosphate synthase |
| Homology with Arabidopsis | Similar to At2g45300: 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase (HF=8e-121) |
| Module size | 6 genes |
| NF | 0.21 |
| %ile | 29.7 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.53 | 75.2 | 0.95 | 1615742_at | CB970670 | 5-enolpyruvylshikimate-3-phosphate synthase | - | 8e-121 | At2g45300 | 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase | O.I. | H.G. | S.X. | |
| 0.67 | 87.9 | 0.96 | 1620412_at | CF511306 | hypothetical protein LOC100247288 | - | 6e-10 | At1g36160 | ACC1 (ACETYL-COENZYME A CARBOXYLASE 1) | O.I. | H.G. | S.X. | |
| 0.55 | 77.3 | 0.96 | 1614440_at | BQ796922 | 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase | - | 2e-53 | At4g39980 | DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1) | O.I. | H.G. | S.X. | |
| 0.33 | 45.7 | 0.96 | 1610068_at | CD711769 | hypothetical protein LOC100252154 | - | 2e-19 | At2g36670 | aspartyl protease family protein | O.I. | H.G. | S.X. | |
| 0.15 | 15.6 | 0.96 | 1618421_at | CF604028 | hypothetical protein LOC100252493 | - | 6e-6 | At3g57560 | aspartate/glutamate/uridylate kinase family protein | O.I. | H.G. | S.X. | |
| 0.04 | 5.2 | 0.96 | 1611681_at | CF513131 | hypothetical protein LOC100241604 | - | 4e+0 | At5g39360 | EDL2 (EID1-like 2) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 4.6 | 97.6 | GSM287877 | Green hard berry B12 from plant 2 cluster distal position, biological rep 1 | GSE11406 | Expression data in individual grape berries during ripening initation | |
| 3.7 | 96.2 | GSM287888 | Green soft berry C24 from plant 2 cluster distal position, biological rep 2 | GSE11406 | Expression data in individual grape berries during ripening initation | |
| 3.4 | 95.5 | GSM287902 | Red soft berry C30 from plant 2 cluster proximal position, biological rep 2 | GSE11406 | Expression data in individual grape berries during ripening initation | |
| 3.2 | 94.9 | GSM287885 | Green soft berry A22 from plant 2 cluster proximal position, biological rep 1 | GSE11406 | Expression data in individual grape berries during ripening initation | |
| 3.0 | 94.2 | GSM147675 | Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation | 4 | | |
| 2.9 | 93.8 | GSM287882 | Green soft berry A21 from plant 1 cluster proximal position, biological rep 2 | GSE11406 | Expression data in individual grape berries during ripening initation | |
| 2.9 | 93.8 | GSM147692 | Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation | 21 | | |
| 2.9 | 93.8 | GSM147699 | Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation | 28 | | |
| 2.7 | 93.0 | GSM147693 | Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation | 22 | | |
| 2.6 | 92.5 | GSM147687 | Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation | 16 | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.80 | 94.6 | Os06g0133900 | At2g45300 | - | 5-enolpyruvylshikimate-3-phosphate synthase (EC2.5.1.19) (Fragment) | 2e-35 | At2g45300 | 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os07g0622200 | At2g45300 | - | Phospho-2-dehydro-3-deoxyheptonate aldolase 1,chloroplast precursor (EC 2.5.1.54)(Phospho-2-keto-3-deoxyheptonate aldolase 1) (DAHPsynthetase 1) (3-deoxy-D-arabino-heptulosonate7-phosphate synthase 1) | 2e-8 | At4g33510 | DHS2 (3-deoxy-d-arabino-heptulosonate 7-phosphate synthase) | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os08g0498100 | At2g45300 | - | Caffeoyl-CoA O-methyltransferase 2 (EC 2.1.1.104)(Trans-caffeoyl-CoA 3-O-methyltransferase 2) (CCoAMT-2)(CCoAOMT-2) | 2e+0 | At3g54000 | - | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os08g0459600 | At2g45300 | - | 12-oxophytodienoate reductase 3 (EC 1.3.1.42) | 2e-7 | At2g06050 | OPR3 (OPDA-REDUCTASE 3) | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | Os11g0604600 | At2g45300 | - | Conserved hypothetical protein | 1e-27 | At2g22120 | protein binding / zinc ion binding | O.I. | H.G. | S.X. | |
| 0.05 | 2.5 | Os05g0135700 | At2g45300 | - | S-adenosylmethionine synthetase 1 (EC 2.5.1.6)(Methionine adenosyltransferase 1) (AdoMet synthetase 1) | 1e-8 | At1g02500 | SAM1 (S-ADENOSYLMETHIONINE SYNTHETASE 1) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Zea_mays |
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