Co-expression analysis

Gene ID	1615722_s_at
Gene name	aquaporin-like
Homology with Arabidopsis	Similar to At2g45960: PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B) (HF=4e-28)
Module size	6 genes
NF	0.28
%ile	39.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	87.9	0.93	1615722_s_at	CF604933	aquaporin-like	-	4e-28	At2g45960	PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1613240_s_at	CF213482	aquaporin-like	-	7e-64	At1g01620	PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1619703_at	AF141643.1	aquaporin-like	-	3e-52	At2g45960	PIP1B (NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1B)	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.97	1621974_at	CB971118	hypothetical protein LOC100262951	-	6e-1	At3g57750	protein kinase, putative	O.I.	H.G.	S.X.	Please select
0.15	15.6	0.96	1608185_at	CB341695	-	-	6e+0	At3g53990	universal stress protein (USP) family protein	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.96	1607469_at	CB977637	hypothetical protein LOC100261135	-	2e-10	At3g17980	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.7	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.3	95.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM147677	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	6
2.9	93.8	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.9	93.8	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
2.7	93.0	GSM147701	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	30
2.6	92.5	GSM147707	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 48 h post inoculation	36
2.6	92.5	GSM147683	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	12

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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