Co-expression analysis

Gene ID	1615721_at
Gene name
Homology with Arabidopsis	Similar to At3g23620: brix domain-containing protein (HF=4e+0)
Module size	6 genes
NF	0.53
%ile	79.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.96	1615721_at	CA818745	-	-	4e+0	At3g23620	brix domain-containing protein	O.I.	H.G.	S.X.	Please select
0.83	94.6	0.96	1610687_at	CF511229	-	-	1e-35	At2g37680	-	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.96	1617509_at	CB974166	-	-	2e+0	At5g07475	plastocyanin-like domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.96	1618360_at	CF204032.1	-	-	5e-13	At2g32080	PUR ALPHA-1	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.96	1607190_at	CB981263	-	-	1e+0	At2g35480	unknown protein	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.95	1606737_at	BQ795334	-	-	3e+0	At2g45860	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.8	96.4	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.7	93.0	GSM436376	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436373	Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM287867	Green hard berry C1 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.0	88.2	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436351	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM287882	Green soft berry A21 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
1.9	87.2	GSM287873	Green hard berry B9 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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