Co-expression analysis

Gene ID	1615682_s_at
Gene name	hypothetical protein LOC100247119
Homology with Arabidopsis	Similar to At4g38740: ROC1 (ROTAMASE CYP 1) (HF=2e-15)
Module size	8 genes
NF	0.24
%ile	33.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	91.3	0.97	1615682_s_at	CA809122	hypothetical protein LOC100247119	-	2e-15	At4g38740	ROC1 (ROTAMASE CYP 1)	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1617485_at	CF209626	-	-	2e-8	At5g66080	protein phosphatase 2C family protein / PP2C family protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.98	1620284_at	CA817004	hypothetical protein LOC100249470	-	1e-17	At4g35220	cyclase family protein	O.I.	H.G.	S.X.	Please select
0.26	32.0	0.98	1607758_at	BQ796718	hypothetical protein LOC100267502	-	3e-20	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1617058_s_at	CA813874	hypothetical protein LOC100246864	-	4e+0	At5g04130	DNA topoisomerase, ATP-hydrolyzing, putative / DNA topoisomerase II, putative / DNA gyrase, putative	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.98	1610389_s_at	CA818339	hypothetical protein LOC100261052	-	1e-13	At4g15000	60S ribosomal protein L27 (RPL27C)	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1619625_s_at	CF214740	hypothetical protein LOC100242662	-	9e-24	At3g55750	60S ribosomal protein L35a (RPL35aD)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.98	1614241_at	CF209157	hypothetical protein LOC100255909	-	7e-6	At1g14685	BPC2 (BASIC PENTACYSTEINE 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	98.5	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
4.1	96.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.4	95.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.1	94.6	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
3.1	94.6	GSM147734	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	63
3.0	94.2	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.8	93.4	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.6	92.5	GSM436384	Seyval (SV, Seyve Villard 5-276) SD, 13h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.5	91.9	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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