Co-expression analysis

Gene ID	1615633_at
Gene name	hypothetical protein LOC100243547
Homology with Arabidopsis	Similar to At2g03550: hydrolase (HF=1e-7)
Module size	6 genes
NF	0.20
%ile	29.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.94	1615633_at	CA813996	hypothetical protein LOC100243547	-	1e-7	At2g03550	hydrolase	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.94	1620734_at	CD799694	hypothetical protein LOC100246175	-	4e+0	At4g03827	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.95	1617846_at	CF210020	hypothetical protein LOC100242395	-	2e-47	At3g57870	SCE1 (SUMO CONJUGATION ENZYME 1)	O.I.	H.G.	S.X.	Please select
0.23	27.5	0.94	1620692_at	CF202341.1	-	-	3e-1	At5g65330	AGL78 (AGAMOUS-LIKE 78)	O.I.	H.G.	S.X.	Please select
0.13	13.3	0.94	1619688_x_at	CF204108.1	-	-	9e-1	At4g35280	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.94	1618737_x_at	CF202021.1	-	-	1e+0	At4g09650	ATPD (ATP SYNTHASE DELTA-SUBUNIT GENE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM287897	Red soft berry C29 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.7	96.2	GSM299456	C_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.6	96.0	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.6	96.0	GSM299457	C_i_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.4	95.5	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
3.2	94.9	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.9	93.8	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287899	Red soft berry C13 from plant 1 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.5	91.9	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM287901	Red soft berry C16 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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