Co-expression analysis

Gene ID	1615617_at
Gene name	hypothetical protein LOC100249849
Homology with Arabidopsis	Similar to At2g05370: - (HF=2e+0)
Module size	6 genes
NF	0.62
%ile	89.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.98	1615617_at	CF603834	hypothetical protein LOC100249849	-	2e+0	At2g05370	-	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1610500_at	CB976882	hypothetical protein LOC100255820	-	2e-78	At4g00740	dehydration-responsive protein-related	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1610573_at	CF210407	hypothetical protein LOC100247694	-	1e-124	At5g18580	FASS (FASS 1)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1607280_at	CF513816	hypothetical protein LOC100259978	-	8e-57	At3g13772	endomembrane protein 70, putative	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.98	1618226_at	CF210927	hypothetical protein LOC100259643	-	7e-77	At3g11540	SPY (SPINDLY)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.98	1619845_at	CB918038	hypothetical protein LOC100252548	-	4e-19	At4g33530	KUP5	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.3	95.2	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
3.0	94.2	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.9	93.8	GSM147681	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	10
2.8	93.4	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.7	93.0	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM147672	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	1
2.4	91.3	GSM147694	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 24 h post inoculation	23
2.1	89.1	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.0	88.2	GSM147690	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 0 h post inoculation	19
1.8	86.0	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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