Co-expression analysis

Gene ID 1615547_at
Gene name hypothetical protein LOC100242710
Homology with ArabidopsisSimilar to At1g42960: - (HF=1e-9)
Module size 6 genes
NF 0.29
%ile 42.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5577.30.981615547_atCF511472hypothetical protein LOC100242710-1e-9At1g42960-O.I.H.G.S.X.
0.5679.40.981610627_atBQ796704hypothetical protein LOC100245074-2e-29At2g30200[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferaseO.I.H.G.S.X.
0.5375.20.981607274_s_atCF513736hypothetical protein LOC100267408-6e-16At4g22360SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.4057.70.981616726_atBQ793969hypothetical protein LOC100255605-8e-11At2g15290TIC21 (TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21)O.I.H.G.S.X.
0.3141.30.981619921_atCF371680hypothetical protein LOC100245497-4e-7At1g62640KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III)O.I.H.G.S.X.
0.1010.30.981613861_atBQ797310hypothetical protein LOC100241344-1e+0At1g57565-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.397.2GSM436368Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
4.397.2GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.294.9GSM436362Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.591.9GSM436405V. riparia (VR, PI588259) LD, 15h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO
2.289.9GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436390V. riparia (VR, PI588259) LD, 15h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM147676Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation5Link to GEO
2.189.1GSM436371Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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