Co-expression analysis

Gene ID	1615547_at
Gene name	hypothetical protein LOC100242710
Homology with Arabidopsis	Similar to At1g42960: - (HF=1e-9)
Module size	6 genes
NF	0.29
%ile	42.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	77.3	0.98	1615547_at	CF511472	hypothetical protein LOC100242710	-	1e-9	At1g42960	-	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.98	1610627_at	BQ796704	hypothetical protein LOC100245074	-	2e-29	At2g30200	[acyl-carrier-protein] S-malonyltransferase/ binding / catalytic/ transferase	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1607274_s_at	CF513736	hypothetical protein LOC100267408	-	6e-16	At4g22360	SWIB complex BAF60b domain-containing protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.98	1616726_at	BQ793969	hypothetical protein LOC100255605	-	8e-11	At2g15290	TIC21 (TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21)	O.I.	H.G.	S.X.	Please select
0.31	41.3	0.98	1619921_at	CF371680	hypothetical protein LOC100245497	-	4e-7	At1g62640	KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III)	O.I.	H.G.	S.X.	Please select
0.10	10.3	0.98	1613861_at	BQ797310	hypothetical protein LOC100241344	-	1e+0	At1g57565	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	97.2	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
3.2	94.9	GSM436362	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.5	91.9	GSM436405	V. riparia (VR, PI588259) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436349	Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147705	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	34
2.2	89.9	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147676	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	5
2.1	89.1	GSM436371	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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