Co-expression analysis

Gene ID	1615422_at
Gene name
Homology with Arabidopsis	Similar to At4g19185: integral membrane family protein (HF=1e+0)
Module size	6 genes
NF	0.00
%ile	0.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.66	1615422_at	CB834352	-	-	1e+0	At4g19185	integral membrane family protein	O.I.	H.G.	S.X.	Please select
0.27	34.0	0.91	1616791_at	CD716417	-	-	9e-1	At2g38025	-	O.I.	H.G.	S.X.	Please select
0.03	4.2	0.87	1609741_at	CF512956	-	-	1e+0	At5g38314	unknown protein	O.I.	H.G.	S.X.	Please select
0.01	2.1	0.91	1608823_at	CF205720.1	-	-	4e-7	At3g52660	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
-	0.5	0.91	1606492_s_at	CF513173	hypothetical protein LOC100245887	-	4e-35	At2g36620	RPL24A (ribosomal protein L24)	O.I.	H.G.	S.X.	Please select
-	0.5	0.91	AFFX-r2-P1-cre-5_at		-	-			-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.4	95.5	GSM436388	V. riparia (VR, PI588259) LD, 15h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436410	V. riparia (VR, PI588259) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
2.0	88.2	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
1.9	87.2	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
1.9	87.2	GSM436390	V. riparia (VR, PI588259) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436381	Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
1.7	84.7	GSM436415	V. riparia (VR, PI588259) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
1.7	84.7	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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