Co-expression analysis

Gene ID	1615364_at
Gene name
Homology with Arabidopsis	Similar to At4g24770: RBP31 (31-KDA RNA BINDING PROTEIN) (HF=2e-8)
Module size	6 genes
NF	0.08
%ile	15.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.80	1615364_at	CB344806	-	-	2e-8	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	O.I.	H.G.	S.X.	Please select
0.29	37.7	0.98	1614897_at	CD798695	hypothetical protein LOC100247155	-	2e-6	At1g22140	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.98	1621952_at	BQ797666	hypothetical protein LOC100259489	-	3e-54	At5g20570	RBX1 (RING-BOX 1)	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.96	1610160_at	CB970380	-	-	4e+0	At3g16800	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.08	8.5	0.98	1608134_at	CF203861.1	hypothetical protein LOC100242295	-	1e-65	At5g23090	NF-YB13 (NUCLEAR FACTOR Y, SUBUNIT B13)	O.I.	H.G.	S.X.	Please select
0.02	3.2	0.94	1622403_s_at	CB969917	-	-	2e+0	At1g78600	LZF1 (LIGHT-REGULATED ZINC FINGER PROTEIN 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.5	99.2	GSM287885	Green soft berry A22 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.1	94.6	GSM287892	Pink soft berry C11 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.7	93.0	GSM287893	Pink soft berry C12 from plant 1 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.3	90.7	GSM436357	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM287888	Green soft berry C24 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM436395	V. riparia (VR, PI588259) LD, 15h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436363	Seyval (SV, Seyve Villard 5-276) LD, 15h 28 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436394	V. riparia (VR, PI588259) LD, 15h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM436407	V. riparia (VR, PI588259) LD, 15h 42 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436364	Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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