Co-expression analysis

Gene ID	1615353_at
Gene name
Homology with Arabidopsis	Similar to At4g04614: unknown protein (HF=4e-12)
Module size	6 genes
NF	0.61
%ile	88.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.97	1615353_at	CB973179	-	-	4e-12	At4g04614	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.97	1620902_a_at	CD801216	-	-	6e-1	At1g67210	proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.97	1617911_at	BQ796680	hypothetical protein LOC100247972	-	9e-2	At5g53560	CB5-E (CYTOCHROME B5 ISOFORM E)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.97	1612278_at	CF074615	hypothetical protein LOC100241738	-	7e-1	At5g37380	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1616660_s_at	CF569214.1	similar to 60S ribosomal protein L19	-	1e+0	At4g29960	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1620757_at	CF372931	hypothetical protein LOC100260825	-	4e-3	At1g51600	TIFY2A	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.7	93.0	GSM147687	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	16
2.5	91.9	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.2	89.9	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.2	89.9	GSM147693	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	22
2.1	89.1	GSM147699	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation	28
2.1	89.1	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.1	89.1	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.1	89.1	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
2.1	89.1	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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