Co-expression analysis

Gene ID	1615321_at
Gene name	hypothetical protein LOC100256286
Homology with Arabidopsis	Similar to At1g04550: IAA12 (AUXIN-INDUCED PROTEIN 12) (HF=2e-18)
Module size	6 genes
NF	0.24
%ile	33.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	92.3	0.96	1615321_at	CF414063	hypothetical protein LOC100256286	-	2e-18	At1g04550	IAA12 (AUXIN-INDUCED PROTEIN 12)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1618802_s_at	CF205022.1	hypothetical protein LOC100264326	-	9e-4	At1g34780	ATAPRL4 (APR-like 4)	O.I.	H.G.	S.X.	Please select
0.36	50.7	0.98	1620765_at	CF215290	hypothetical protein LOC100266143	-	2e-124	At1g20090	ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2)	O.I.	H.G.	S.X.	Please select
0.32	43.1	0.97	1617929_at	CF403754	hypothetical protein LOC100254761	-	3e-1	At4g32870	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	24.0	0.98	1611702_at	CF207763	-	-	1e+0	At5g66290	unknown protein	O.I.	H.G.	S.X.	Please select
0.09	9.4	0.97	1612818_at	CF414592	hypothetical protein LOC100265822	-	6e-33	At1g51060	HTA10	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.0	94.2	GSM147729	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	58
2.4	91.3	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.2	89.9	GSM436354	Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147741	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	70
1.9	87.2	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
1.9	87.2	GSM436360	Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
1.8	86.0	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
1.8	86.0	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
1.8	86.0	GSM147711	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	40
1.7	84.7	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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