Co-expression analysis

Gene ID	1615315_at
Gene name	hypothetical protein LOC100251685
Homology with Arabidopsis	Similar to At4g21450: vesicle-associated membrane family protein / VAMP family protein (HF=5e-54)
Module size	8 genes
NF	0.26
%ile	36.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	99.2	0.98	1615315_at	CB921193	hypothetical protein LOC100251685	-	5e-54	At4g21450	vesicle-associated membrane family protein / VAMP family protein	O.I.	H.G.	S.X.	Please select
0.43	61.5	0.99	1609293_at	CB910867	hypothetical protein LOC100242047	-	3e-41	At3g59990	MAP2B (METHIONINE AMINOPEPTIDASE 2B)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1618760_at	CF511611	hypothetical protein LOC100268141	-	1e+0	At2g03310	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.98	1620284_at	CA817004	hypothetical protein LOC100249470	-	1e-17	At4g35220	cyclase family protein	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.99	1616584_at	CF514925	hypothetical protein LOC100240812	-	1e-73	At5g27630	ACBP5 (ACYL-COA BINDING PROTEIN 5)	O.I.	H.G.	S.X.	Please select
0.22	25.6	0.99	1616704_at	CF213956	hypothetical protein LOC100262746	-	5e-28	At4g31180	aspartyl-tRNA synthetase, putative / aspartate--tRNA ligase, putative	O.I.	H.G.	S.X.	Please select
0.16	16.7	0.98	1615955_s_at	CA817833	similar to small nuclear ribonucleoprotein E	-	8e-45	At2g18740	small nuclear ribonucleoprotein E, putative / snRNP-E, putative / Sm protein E, putative	O.I.	H.G.	S.X.	Please select
0.14	14.4	0.98	1611813_s_at	BQ794797	hypothetical protein LOC100260422	-	1e-6	At5g60460	sec61beta family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147735	Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation	64
2.8	93.4	GSM147717	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	46
2.6	92.5	GSM436370	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.3	90.7	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM436347	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM436356	Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM436348	Seyval (SV, Seyve Villard 5-276) LD, 15h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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