Co-expression analysis

Gene ID 1615302_at
Gene name
Homology with ArabidopsisSimilar to At3g44716: unknown protein (HF=7e-1)
Module size 9 genes
NF 0.67
%ile 92.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6384.30.971615302_atCF414670--7e-1At3g44716unknown proteinO.I.H.G.S.X.
0.8093.60.971616780_atCF415162hypothetical protein LOC100265405-2e-8At5g60210-O.I.H.G.S.X.
0.7491.00.971610422_atCF215178hypothetical protein LOC100246625-5e-12At3g51670SEC14 cytosolic factor family protein / phosphoglyceride transfer family proteinO.I.H.G.S.X.
0.7088.60.971620583_s_atCF213679hypothetical protein LOC100247041-5e-1At4g24231unknown proteinO.I.H.G.S.X.
0.6787.90.971619869_atCF513928hypothetical protein LOC100263034-3e-1At4g20970basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.6183.20.971611158_atCF515951hypothetical protein LOC100260886-5e-12At1g35780unknown proteinO.I.H.G.S.X.
0.5679.40.971622002_atCF513939hypothetical protein LOC100264846-2e-1At1g29951CPuORF35 (Conserved peptide upstream open reading frame 35)O.I.H.G.S.X.
0.5375.20.971620164_atCF414117hypothetical protein LOC100263547-6e+0At5g10160beta-hydroxyacyl-ACP dehydratase, putativeO.I.H.G.S.X.
0.5273.90.971617368_atCF512540similar to beta-1,3-glucanase-1e+0At2g47110UBQ6O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.993.8GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.390.7GSM147729Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation58Link to GEO
2.390.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.289.9GSM287881Green soft berry B10 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.289.9GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.289.9GSM287893Pink soft berry C12 from plant 1 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.088.2GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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