Co-expression analysis

Gene ID 1615231_at
Gene name hypothetical protein LOC100254995
Homology with ArabidopsisSimilar to At2g31680: AtRABA5d (Arabidopsis Rab GTPase homolog A5d) (HF=1e-19)
Module size 6 genes
NF 0.04
%ile 9.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.60.961615231_atCF607773hypothetical protein LOC100254995-1e-19At2g31680AtRABA5d (Arabidopsis Rab GTPase homolog A5d)O.I.H.G.S.X.
0.3650.70.961617454_atBQ798893hypothetical protein LOC100261773-3e+0At3g10700GHMP kinase family proteinO.I.H.G.S.X.
0.1819.40.961608523_atCB339561hypothetical protein LOC100253981-4e+0At5g14340AtMYB40 (myb domain protein 40)O.I.H.G.S.X.
0.045.20.961610794_atCB970276hypothetical protein LOC100254003-2e-46At1g20330SMT2 (STEROL METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.034.20.961607962_atCB973840similar to pentatricopeptide repeat-containing protein At1g32415-7e-12At1g32410vacuolar protein sorting 55 family protein / VPS55 family proteinO.I.H.G.S.X.
0.023.20.951606799_s_atCB968910hypothetical protein LOC100253273 /// hypothetical protein LOC100248145-4e-101At1g04410malate dehydrogenase, cytosolic, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.198.1GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
4.697.6GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
4.497.3GSM147693Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation22Link to GEO
4.497.3GSM147675Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation4Link to GEO
4.397.2GSM147681Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation10Link to GEO
4.297.1GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.996.6GSM147739Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation68Link to GEO
3.796.2GSM147705Vitis vinifera 'Cabernet sauvignon' mock inoculated at 12 h post inoculation34Link to GEO
3.696.0GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
3.595.7GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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