Co-expression analysis

Gene ID	1615203_at
Gene name	hypothetical protein LOC100258284
Homology with Arabidopsis	Similar to At5g57060: unknown protein (HF=7e-2)
Module size	6 genes
NF	0.40
%ile	59.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.98	1615203_at	CA818658	hypothetical protein LOC100258284	-	7e-2	At5g57060	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1610542_at	CB972194	hypothetical protein LOC100254379	-	8e-83	At5g25760	PEX4 (PEROXIN4)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1618838_at	CA814288	-	-	2e-2	At3g59280	TXR1 (THAXTOMIN A RESISTANT 1)	O.I.	H.G.	S.X.	Please select
0.33	45.7	0.98	1619375_at	CD711519	hypothetical protein LOC100247352	-	3e-30	At1g69410	ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1613031_at	CF373574	hypothetical protein LOC100248106	-	1e-6	At1g33520	MOS2 (modifier of snc1, 2)	O.I.	H.G.	S.X.	Please select
0.18	19.4	0.98	1618198_at	CB007829	hypothetical protein LOC100242410	-	3e-1	At1g51200	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	98.5	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.2	94.9	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.4	91.3	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147675	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	4
2.2	89.9	GSM299461	C_ni_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.2	89.9	GSM147743	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	72
2.1	89.1	GSM322362	genotype: Chardonnay - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.1	89.1	GSM147730	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	59
2.0	88.2	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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