Co-expression analysis

Gene ID 1615168_at
Gene name hypothetical protein LOC100250140
Homology with ArabidopsisSimilar to At4g31580: SRZ-22 (HF=4e+0)
Module size 6 genes
NF 0.43
%ile 64.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.901615168_atCF602900hypothetical protein LOC100250140-4e+0At4g31580SRZ-22O.I.H.G.S.X.
0.5072.70.931620203_atCB970029--2e+0At5g54110ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED)O.I.H.G.S.X.
0.5072.70.951608066_atCB342796hypothetical protein LOC100254977-5e-1At5g43570serine-type endopeptidase inhibitorO.I.H.G.S.X.
0.4767.70.901612648_atCD798203hypothetical protein LOC100260257-3e-1At1g42960-O.I.H.G.S.X.
0.3853.60.931610366_atCB976250hypothetical protein LOC100261806-8e-5At4g22200AKT2/3 (ARABIDOPSIS POTASSIUM TRANSPORT 2/3)O.I.H.G.S.X.
0.2530.50.901619325_atCF211836hypothetical protein LOC100263459-6e-4At3g14660CYP72A13O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.096.7GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
3.696.0GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
3.395.2GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
3.395.2GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
3.194.6GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
3.094.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.993.8GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.793.0GSM147712Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation41Link to GEO
2.491.3GSM436367Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage