Co-expression analysis

Gene ID 1615153_at
Gene name
Homology with ArabidopsisSimilar to At1g60630: leucine-rich repeat family protein (HF=2e-8)
Module size 6 genes
NF 0.08
%ile 15.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.80.871615153_atCD715305--2e-8At1g60630leucine-rich repeat family proteinO.I.H.G.S.X.
0.4057.70.981607756_s_atCF519234hypothetical protein LOC100241574-3e-40At3g08510ATPLC2 (PHOSPHOLIPASE C 2)O.I.H.G.S.X.
0.2937.70.961621000_atCF209896hypothetical protein LOC100245551-1e+0At1g06180ATMYB13 (MYB DOMAIN PROTEIN 13)O.I.H.G.S.X.
0.1414.40.981614120_atCB349861--4e-3At5g40550unknown proteinO.I.H.G.S.X.
0.1414.40.981612757_atCD801743hypothetical protein LOC100241266-1e+0At2g32560F-box family proteinO.I.H.G.S.X.
0.023.20.961615115_atCD801173hypothetical protein LOC100244778-1e-38At5g05080UBC22 (ubiquitin-conjugating enzyme 22)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.099.1GSM147717Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation46Link to GEO
4.397.2GSM147735Vitis aestivalis 'Norton ' mock inoculated at 12 h post inoculation64Link to GEO
2.692.5GSM147716Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation45Link to GEO
2.491.3GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.491.3GSM147722Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation51Link to GEO
2.289.9GSM147711Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation40Link to GEO
2.088.2GSM436420V. riparia (VR, PI588259) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147734Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation63Link to GEO
1.987.2GSM436360Seyval (SV, Seyve Villard 5-276) LD, 15h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436381Seyval (SV, Seyve Villard 5-276) SD, 13h 21 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, Ta.27455.1.A1_at, orthologous to the query gene, 1615153_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8192.4Ta.27455.1.A1_atAt1g60630--3e-5At4g23230protein kinase family proteinO.I.H.G.S.X.
0.4666.8TaAffx.22762.1.S1_atAt1g60630--1e-1At1g2310010 kDa chaperonin, putativeO.I.H.G.S.X.
0.3956.1TaAffx.26138.1.S1_atAt1g60630--2e-1At5g65220ribosomal protein L29 family proteinO.I.H.G.S.X.
0.3142.7TaAffx.81077.1.S1_s_atAt1g60630--5e-3At3g20900unknown proteinO.I.H.G.S.X.
0.2839.2Ta.15206.1.S1_atAt1g60630--3e-1At2g22320unknown proteinO.I.H.G.S.X.
0.2839.2TaAffx.80274.1.S1_atAt1g60630--2e+1At5g10860CBS domain-containing proteinO.I.H.G.S.X.
0.2633.6TaAffx.53352.2.S1_x_atAt1g60630--1e+0At1g80050APT2 (ADENINE PHOSPHORIBOSYL TRANSFERASE 2)O.I.H.G.S.X.
0.2532.1TaAffx.32054.1.S1_atAt1g60630--2e+1At5g20650COPT5O.I.H.G.S.X.
0.2532.1TaAffx.26416.1.S1_atAt1g60630--4e+1At5g01350unknown proteinO.I.H.G.S.X.
0.2430.3TaAffx.30032.1.S1_atAt1g60630--4e+0At3g03890FMN bindingO.I.H.G.S.X.
0.2024.0TaAffx.23270.2.A1_atAt1g60630--2e+1At5g22608unknown proteinO.I.H.G.S.X.
0.1922.4TaAffx.55888.1.S1_atAt1g60630--6e-2At1g16360LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.H.G.S.X.
0.1821.0TaAffx.109952.1.S1_atAt1g60630--2e-1At5g12130PDE149 (PIGMENT DEFECTIVE 149)O.I.H.G.S.X.
0.1821.0TaAffx.96386.1.S1_atAt1g60630--8e+0At1g05760RTM1 (restricted tev movement 1)O.I.H.G.S.X.
0.1719.8TaAffx.7033.1.S1_atAt1g60630--3e-1At5g4854033 kDa secretory protein-relatedO.I.H.G.S.X.
0.1719.8TaAffx.53682.1.S1_x_atAt1g60630--4e+0At5g40590DC1 domain-containing proteinO.I.H.G.S.X.
0.1415.8TaAffx.111613.1.S1_atAt1g60630--9e-1At3g57670NTT (NO TRANSMITTING TRACT)O.I.H.G.S.X.
0.1213.3TaAffx.55435.1.S1_atAt1g60630--2e-1At5g17550PEX19-2O.I.H.G.S.X.
0.1112.4Ta.23299.2.S1_atAt1g60630--9e-1At5g06380unknown proteinO.I.H.G.S.X.
0.0910.4Ta.10240.2.S1_atAt1g60630--4e-15At4g35950ARAC6 (ARABIDOPSIS RAC-LIKE 6)O.I.H.G.S.X.
0.0910.4TaAffx.69044.1.S1_atAt1g60630--2e-5At5g66880SNRK2.3 (SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3)O.I.H.G.S.X.
0.089.4TaAffx.106663.1.S1_atAt1g60630--1e+0At5g23440FTRA1 (ferredoxin/thioredoxin reductase subunit A (variable subunit) 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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