Co-expression analysis

Gene ID	1615129_at
Gene name	hypothetical protein LOC100256954
Homology with Arabidopsis	Similar to At5g58240: bis(5'-adenosyl)-triphosphatase, putative (HF=3e-11)
Module size	6 genes
NF	0.29
%ile	42.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	72.7	0.98	1615129_at	CF518930	hypothetical protein LOC100256954	-	3e-11	At5g58240	bis(5'-adenosyl)-triphosphatase, putative	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.97	1619524_at	CF517397	-	-	6e-2	At5g13240	transcription regulator	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.98	1616020_a_at	CA817685	hypothetical protein LOC100242210 /// hypothetical protein LOC100265608	-	1e+0	At3g62420	ATBZIP53 (BASIC REGION/LEUCINE ZIPPER MOTIF 53)	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.97	1621021_at	CF208345	hypothetical protein LOC100249161	-	2e-1	At5g56610	dual specificity protein phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.97	1611783_at	BQ792690	hypothetical protein LOC100262520	-	1e+0	At2g43570	chitinase, putative	O.I.	H.G.	S.X.	Please select
0.17	18.2	0.97	1615260_at	CF372907	similar to FAD-binding domain-containing protein	-	4e-4	At1g32310	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.5	95.7	GSM322369	genotype: Incrocio Manzoni - disease type: Healthy - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.0	94.2	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
3.0	94.2	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
3.0	94.2	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.8	93.4	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42
2.7	93.0	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.7	93.0	GSM147724	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	53
2.6	92.5	GSM147715	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	44
2.6	92.5	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.6	92.5	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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