Co-expression analysis

Gene ID	1615105_s_at
Gene name	hypothetical protein LOC100256979
Homology with Arabidopsis	Similar to At1g07930: elongation factor 1-alpha / EF-1-alpha (HF=0)
Module size	6 genes
NF	0.53
%ile	79.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.99	1615105_s_at	CF568901	hypothetical protein LOC100256979	-	0	At1g07930	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.99	1620213_at	CB981229	hypothetical protein LOC100252268	-	5e-1	At1g13600	AtbZIP58 (Arabidopsis thaliana basic leucine-zipper 58)	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1620044_s_at	CF209634	hypothetical protein LOC100247307	-	7e-8	At5g61510	NADP-dependent oxidoreductase, putative	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1612493_at	BQ799979	hypothetical protein LOC100250837	-	3e-3	At5g57870	eukaryotic translation initiation factor 4F, putative / eIF-4F, putative	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1608087_s_at	CF568810	glyceraldehyde-3-phosphate dehydrogenase	-	2e-103	At1g13440	GAPC2 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2)	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.99	1610193_at	CF214569	hypothetical protein LOC100242819	-	1e-53	At1g17880	nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147732	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	61
2.5	91.9	GSM147726	Vitis aestivalis 'Norton ' mock inoculated at 0 h post inoculation	55
2.3	90.7	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
2.3	90.7	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.2	89.9	GSM287900	Red soft berry C15 from plant 1 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
2.2	89.9	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
2.2	89.9	GSM147716	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	45
2.2	89.9	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.1	89.1	GSM147733	Vitis aestivalis 'Norton ' mock inoculateds at 4 h post inoculation	62
2.1	89.1	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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