Co-expression analysis

Gene ID	1615073_at
Gene name	GAGA-binding transcriptional activator BBR/BPC6-like
Homology with Arabidopsis	Similar to At5g42520: ATBPC6 (HF=1e-40)
Module size	6 genes
NF	0.64
%ile	90.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.1	0.98	1615073_at	CD798908	GAGA-binding transcriptional activator BBR/BPC6-like	-	1e-40	At5g42520	ATBPC6	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.98	1609850_at	CB979570	hypothetical protein LOC100244857	-	3e-7	At1g76510	ARID/BRIGHT DNA-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.98	1611616_at	CF406000	hypothetical protein LOC100250213	-	8e-12	At2g30530	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1609948_at	BQ793462	hypothetical protein LOC100259405	-	3e-1	At3g21710	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	80.6	0.98	1614891_s_at	BQ792530	hypothetical protein LOC100251643	-	2e-25	At3g56680	nucleic acid binding	O.I.	H.G.	S.X.	Please select
0.38	53.6	0.98	1621094_s_at	CF214762	similar to AT4g27960	-	1e-72	At5g41700	UBC8 (UBIQUITIN CONJUGATING ENZYME 8)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.5	98.4	GSM287903	Red soft berry A7 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
4.8	97.8	GSM322370	genotype: Incrocio Manzoni - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.5	97.5	GSM322366	genotype: Chardonnay - disease type: Healthy - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
4.5	97.5	GSM287902	Red soft berry C30 from plant 2 cluster proximal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.6	96.0	GSM287889	Pink soft berry B8 from plant 1 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.6	96.0	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.5	95.7	GSM287904	Red soft berry C31 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.5	95.7	GSM287879	Green hard berry C19 from plant 2 cluster distal position, biological rep 2	GSE11406	Expression data in individual grape berries during ripening initation
3.5	95.7	GSM287887	Green soft berry C23 from plant 2 cluster distal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation
3.3	95.2	GSM287890	Pink soft berry C25 from plant 2 cluster proximal position, biological rep 1	GSE11406	Expression data in individual grape berries during ripening initation

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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