Co-expression analysis

Gene ID 1615058_at
Gene name hypothetical protein LOC100251131
Homology with ArabidopsisSimilar to At3g28290: AT14A (HF=4e+0)
Module size 6 genes
NF 0.49
%ile 74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5980.60.981615058_atCB349554hypothetical protein LOC100251131-4e+0At3g28290AT14AO.I.H.G.S.X.
0.6787.90.981622571_atCB970577hypothetical protein LOC100255631-3e-11At2g21230bZIP family transcription factorO.I.H.G.S.X.
0.6183.20.981610376_atCB922451hypothetical protein LOC100241274-8e-6At5g65540unknown proteinO.I.H.G.S.X.
0.5577.30.981610828_atCB974880hypothetical protein LOC100252326-3e-5At5g46750AGD9 (ARF-GAP DOMAIN 9)O.I.H.G.S.X.
0.4464.10.981617625_atCB006850hypothetical LOC100246722-2e-6At3g05680EMB2016 (embryo defective 2016)O.I.H.G.S.X.
0.2530.50.981619248_atCA813733hypothetical protein LOC100264750-3e-1At5g18100CSD3 (copper/zinc superoxide dismutase 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.299.1GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
3.094.2GSM436369Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.591.9GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.289.9GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.289.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.289.9GSM147740Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation69Link to GEO
2.088.2GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM147721Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation50Link to GEO
1.987.2GSM436378Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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