Co-expression analysis

Gene ID	1615058_at
Gene name	hypothetical protein LOC100251131
Homology with Arabidopsis	Similar to At3g28290: AT14A (HF=4e+0)
Module size	6 genes
NF	0.49
%ile	74.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.98	1615058_at	CB349554	hypothetical protein LOC100251131	-	4e+0	At3g28290	AT14A	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1622571_at	CB970577	hypothetical protein LOC100255631	-	3e-11	At2g21230	bZIP family transcription factor	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.98	1610376_at	CB922451	hypothetical protein LOC100241274	-	8e-6	At5g65540	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	77.3	0.98	1610828_at	CB974880	hypothetical protein LOC100252326	-	3e-5	At5g46750	AGD9 (ARF-GAP DOMAIN 9)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1617625_at	CB006850	hypothetical LOC100246722	-	2e-6	At3g05680	EMB2016 (embryo defective 2016)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1619248_at	CA813733	hypothetical protein LOC100264750	-	3e-1	At5g18100	CSD3 (copper/zinc superoxide dismutase 3)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	99.1	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
3.0	94.2	GSM436369	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM147723	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation	52
2.5	91.9	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.2	89.9	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
2.2	89.9	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.2	89.9	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
2.0	88.2	GSM322367	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
1.9	87.2	GSM436378	Seyval (SV, Seyve Villard 5-276) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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