Co-expression analysis

Gene ID 1615055_at
Gene name
Homology with ArabidopsisSimilar to At3g48030: hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein (HF=3e-19)
Module size 7 genes
NF 0.67
%ile 92.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7189.50.911615055_atCK138121.1--3e-19At3g48030hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7390.80.931621874_x_atCF204991.1--2e-23At5g52240MSBP1 (membrane steroid binding protein 1)O.I.H.G.S.X.
0.7189.50.921608921_x_atCF205715.1--3e-38At3g6024560S ribosomal protein L37a (RPL37aC)O.I.H.G.S.X.
0.6384.30.931610010_atCF200766.1--6e-15At5g64350FKBP12 (FK506-BINDING PROTEIN)O.I.H.G.S.X.
0.6183.20.921620723_atCF204991.1--2e-23At5g52240MSBP1 (membrane steroid binding protein 1)O.I.H.G.S.X.
0.5577.30.931617978_atCF201431.1--1e+1At5g28620protein kinase C-relatedO.I.H.G.S.X.
0.4361.50.951612496_atCB001447--3e-17At2g29550TUB7O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
2.491.3GSM147743Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation72Link to GEO
2.491.3GSM436372Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.390.7GSM147710Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation39Link to GEO
2.289.9GSM147728Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation57Link to GEO
2.189.1GSM147725Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation54Link to GEO
2.189.1GSM147708Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation37Link to GEO
2.189.1GSM147730Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation59Link to GEO
2.189.1GSM147723Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 12 h post inoculation52Link to GEO
2.088.2GSM436349Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM147742Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation71Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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