Co-expression analysis

Gene ID	1615024_at
Gene name	hypothetical protein LOC100261826
Homology with Arabidopsis	Similar to At2g05840: PAA2 (20S PROTEASOME SUBUNIT PAA2) (HF=2e-27)
Module size	6 genes
NF	0.56
%ile	83.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.99	1615024_at	CB911127	hypothetical protein LOC100261826	-	2e-27	At2g05840	PAA2 (20S PROTEASOME SUBUNIT PAA2)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.99	1620963_at	CF403847	hypothetical protein LOC100247592	-	7e-49	At5g58230	MSI1 (MULTICOPY SUPRESSOR OF IRA1)	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.99	1614072_at	BQ799158	hypothetical protein LOC100250187	-	1e+0	At1g56680	glycoside hydrolase family 19 protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.99	1606841_s_at	CF513194	similar to UBC13A/UBC35 (UBIQUITIN-CONJUGATING ENZYME35); protein binding / ubiquitin-protein ligase	-	1e-62	At1g78870	UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1613731_at	CF513972	hypothetical protein LOC100248748	-	2e-5	At5g63840	RSW3 (RADIAL SWELLING 3)	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1613905_at	CF210463	hypothetical protein LOC100254141	-	3e-13	At5g08160	ATPK3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.1	98.1	GSM436415	V. riparia (VR, PI588259) SD, 13h 7 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
4.3	97.2	GSM147709	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	38
3.0	94.2	GSM436416	V. riparia (VR, PI588259) SD, 13h 7 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.6	92.5	GSM436401	V. riparia (VR, PI588259) LD, 15h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436422	V. riparia (VR, PI588259) SD, 13h 21 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM436413	V. riparia (VR, PI588259) SD, 13h 3 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM436423	V. riparia (VR, PI588259) SD, 13h 21 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436411	V. riparia (VR, PI588259) SD, 13h 1 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM436420	V. riparia (VR, PI588259) SD, 13h 14 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.1	89.1	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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