Co-expression analysis

Gene ID	1614977_at
Gene name
Homology with Arabidopsis	Similar to At5g17480: APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1) (HF=2e+1)
Module size	12 genes
NF	0.44
%ile	65.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	80.6	0.96	1614977_at	CB978594	-	-	2e+1	At5g17480	APC1 (ARABIDOPSIS POLLEN CALCIUM-BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.98	1622662_at	CF510959	hypothetical protein LOC100249169	-	1e-47	At5g23670	LCB2	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1608047_at	CF405221	hypothetical protein LOC100267805	-	1e-5	At3g10260	reticulon family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.97	1617283_at	CF372456	hypothetical LOC100245758	-	4e-20	At3g49680	BCAT3 (BRANCHED-CHAIN AMINOTRANSFERASE 3)	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1614352_at	CD801544	hypothetical protein LOC100244495	-	2e-15	At5g42000	ORMDL family protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1606431_at	BQ796467	hypothetical protein LOC100242612	-	6e-1	At3g26980	MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.48	68.8	0.98	1615601_at	BQ792209	hypothetical protein LOC100265898	-	5e-9	At4g02370	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.97	1619908_at	CD798796	hypothetical protein LOC100265022	-	2e-5	At3g55640	mitochondrial substrate carrier family protein	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1618794_at	CB976136	hypothetical protein LOC100240866	-	1e-13	At5g65010	ASN2 (ASPARAGINE SYNTHETASE 2)	O.I.	H.G.	S.X.	Please select
0.28	37.7	0.97	1619063_at	CA818733	hypothetical protein LOC100249276	-	2e-43	At1g52740	HTA9 (HISTONE H2A PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.25	30.5	0.98	1610542_at	CB972194	hypothetical protein LOC100254379	-	8e-83	At5g25760	PEX4 (PEROXIN4)	O.I.	H.G.	S.X.	Please select
0.24	28.7	0.98	1614858_at	CD801986	hypothetical protein LOC100258231	-	1e-6	At5g04430	BTR1L (BINDING TO TOMV RNA 1L (LONG FORM))	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.8	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
3.5	95.7	GSM322368	genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
3.3	95.2	GSM147722	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	51
3.3	95.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
2.5	91.9	GSM436368	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep2	GSE17502	Photoperiod regulation of grape bud dormancy
2.4	91.3	GSM147728	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	57
2.4	91.3	GSM436372	Seyval (SV, Seyve Villard 5-276) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy
2.3	90.7	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
2.2	89.9	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.0	88.2	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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