Co-expression analysis

Gene ID 1614893_at
Gene name
Homology with ArabidopsisSimilar to At1g78950: beta-amyrin synthase, putative (HF=1e-3)
Module size 17 genes
NF 0.12
%ile 19.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.891614893_atCF568825--1e-3At1g78950beta-amyrin synthase, putativeO.I.H.G.S.X.
0.3039.40.961619842_s_atBQ793715hypothetical protein LOC100244132-1e+0At5g08220unknown proteinO.I.H.G.S.X.
0.2937.70.941615583_atCD800165--2e-1At1g71340glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.2734.00.951616925_atCB349059hypothetical protein LOC100255820-7e-5At4g00740dehydration-responsive protein-relatedO.I.H.G.S.X.
0.2225.60.941611353_atCK138189.1--1e-9At3g57780-O.I.H.G.S.X.
0.2022.40.931610470_atCF202637.1--1e-7At5g15150ATHB-3 (ARABIDOPSIS THALIANA HOMEOBOX 3)O.I.H.G.S.X.
0.1819.40.951608547_atCF371670hypothetical protein LOC100253515-6e-1At4g03292nucleic acid bindingO.I.H.G.S.X.
0.1718.20.941614497_atCB001608--3e+0At3g52980RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.1718.20.941614217_atCK138191.1hypothetical protein LOC100254189-4e+0Atmg00650-O.I.H.G.S.X.
0.1718.20.951621260_atBQ797265--3e-1At4g30630unknown proteinO.I.H.G.S.X.
0.1515.60.961606871_atCB970216hypothetical protein LOC100265666-1e-3At4g11090unknown proteinO.I.H.G.S.X.
0.1414.40.961608638_atCF404187--4e+0At5g42223-O.I.H.G.S.X.
0.1313.30.931621839_atCD715518--5e+0At4g14550IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14)O.I.H.G.S.X.
0.077.80.951607768_atCF201183.1--4e-13At3g02710nuclear associated protein-related / NAP-relatedO.I.H.G.S.X.
0.056.00.951610277_atCF208016hypothetical protein LOC100257821-2e-1At1g17710phosphataseO.I.H.G.S.X.
0.045.20.961611191_atCF207954hypothetical protein LOC100264622-1e-60At5g11850protein kinase family proteinO.I.H.G.S.X.
0.023.20.941609388_atCF568898--2e-2At1g32400TOM2A (TOBAMOVIRUS MULTIPLICATION 2A)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.597.5GSM299456C_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.996.6GSM299457C_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.696.0GSM299454B_i_rep2GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
3.395.2GSM299453B_i_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
2.793.0GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.886.0GSM299461C_ni_rep1GSE11857Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genesLink to GEO
1.886.0GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.784.7GSM436409V. riparia (VR, PI588259) SD, 13h 1 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.784.7GSM287899Red soft berry C13 from plant 1 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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