Co-expression analysis

Gene ID	1614871_s_at
Gene name	hypothetical protein LOC100266189
Homology with Arabidopsis	Similar to At4g32551: LUG (LEUNIG) (HF=7e-5)
Module size	6 genes
NF	0.59
%ile	86.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	90.8	0.99	1614871_s_at	CF404051	hypothetical protein LOC100266189	-	7e-5	At4g32551	LUG (LEUNIG)	O.I.	H.G.	S.X.	Please select
0.80	93.6	0.99	1610845_at	CF208629	hypothetical protein LOC100245365	-	2e+0	At1g68030	PHD finger protein-related	O.I.	H.G.	S.X.	Please select
0.73	90.8	0.99	1606542_at	BQ797856	hypothetical protein LOC100250325	-	1e+0	At2g10450	14-3-3 protein, putative / grf15, putative	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.99	1606671_at	CA809598	hypothetical protein LOC100262399	-	3e-21	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1622462_at	CB916510	hypothetical protein LOC100265163	-	4e-23	At2g14740	ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)	O.I.	H.G.	S.X.	Please select
0.42	60.1	0.99	1617329_at	BQ798056	hypothetical protein LOC100255368	-	5e-49	At3g19760	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM147725	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	54
2.4	91.3	GSM299453	B_i_rep1	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.1	89.1	GSM299452	B_ni_rep2	GSE11857	Gene expression patterns associated with grapevine resistance to downy mildew mediated by the Rpv1 and Rpv2 genes
2.1	89.1	GSM147736	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	65
2.1	89.1	GSM147708	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	37
2.0	88.2	GSM147718	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 24 h post inoculation	47
2.0	88.2	GSM322363	genotype: Chardonnay - disease type: Bois Noir infected - rep3	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.0	88.2	GSM147731	Vitis aestivalis 'Norton ' mock inoculated at 48 h post inoculation	60
2.0	88.2	GSM322361	genotype: Chardonnay - disease type: Bois Noir infected - rep1	GSE12842	Gene expression in grapevine in response to Bois noir infection
1.9	87.2	GSM147713	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 48 h post inoculation	42

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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