Co-expression analysis

Gene ID	1614869_at
Gene name	hypothetical protein LOC100251847
Homology with Arabidopsis	Similar to At1g50500: HIT1 (HEAT-INTOLERANT 1) (HF=1e-12)
Module size	19 genes
NF	0.49
%ile	72.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	91.3	0.98	1614869_at	CF208077	hypothetical protein LOC100251847	-	1e-12	At1g50500	HIT1 (HEAT-INTOLERANT 1)	O.I.	H.G.	S.X.	Please select
0.61	83.2	0.99	1618130_at	CF511795	hypothetical protein LOC100261654	-	1e+0	At5g23040	CDF1 (CELL GROWTH DEFECT FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.56	79.4	0.98	1617903_at	CF207014.1	hypothetical protein LOC100266203	-	7e+0	At5g54850	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.98	1616981_at	CB971105	phospholipase D alpha	-	4e-52	At3g15730	PLDALPHA1 (PHOSPHOLIPASE D ALPHA 1)	O.I.	H.G.	S.X.	Please select
0.53	75.2	0.99	1607887_at	CF215963	hypothetical protein LOC100241008	-	2e+0	At5g50880	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.7	0.98	1614620_at	CF404986	hypothetical protein LOC100249044	-	5e-37	At5g37310	-	O.I.	H.G.	S.X.	Please select
0.49	69.3	0.98	1620790_at	CF515444	hypothetical protein LOC100249710	-	5e-4	At5g43960	nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.99	1622518_at	CF514125	hypothetical protein LOC100255499	-	1e+0	At3g49430	SRp34a (Ser/Arg-rich protein 34a)	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1612293_at	CB346119	hypothetical protein LOC100264912	-	1e-65	At4g09000	14-3-3-like protein GF14 chi / general regulatory factor 1 (GRF1)	O.I.	H.G.	S.X.	Please select
0.47	67.7	0.98	1610845_at	CF208629	hypothetical protein LOC100245365	-	2e+0	At1g68030	PHD finger protein-related	O.I.	H.G.	S.X.	Please select
0.46	66.5	0.98	1622462_at	CB916510	hypothetical protein LOC100265163	-	4e-23	At2g14740	ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)	O.I.	H.G.	S.X.	Please select
0.45	64.6	0.98	1617767_s_at	CD801851	hypothetical protein LOC100259387	-	2e-15	At5g50870	UBC27 (ubiquitin-conjugating enzyme 27)	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.98	1613706_at	CA808981	hypothetical protein LOC100258971	-	2e-15	At4g38930	ubiquitin fusion degradation UFD1 family protein	O.I.	H.G.	S.X.	Please select
0.44	64.1	0.99	1618690_at	CF207597	hypothetical protein LOC100259195	-	3e-16	At1g20110	zinc finger (FYVE type) family protein	O.I.	H.G.	S.X.	Please select
0.40	57.7	0.99	1606368_s_at	CF208516	actin 1	-	0	At5g09810	ACT7 (ACTIN 7)	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.99	1611412_at	CF517248	hypothetical protein LOC100244694	-	2e+0	At5g37480	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.98	1606671_at	CA809598	hypothetical protein LOC100262399	-	3e-21	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select
0.39	54.9	0.99	AFFX-Vvi-actin-3_s_at		actin 1	-			-	O.I.	H.G.	S.X.	Please select
0.35	48.5	0.98	1614602_at	CB004149	hypothetical protein LOC100244335	-	1e-32	At2g47900	AtTLP3 (TUBBY LIKE PROTEIN 3)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.6	92.5	GSM322365	genotype: Chardonnay - disease type: Healthy - rep2	GSE12842	Gene expression in grapevine in response to Bois noir infection
2.5	91.9	GSM436367	Seyval (SV, Seyve Villard 5-276) SD, 13h 1 days - rep1	GSE17502	Photoperiod regulation of grape bud dormancy
2.2	89.9	GSM147721	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	50
2.0	88.2	GSM147720	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 0 h post inoculation	49
1.9	87.2	GSM147710	Vitis aestivalis 'Norton ' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	39
1.8	86.0	GSM147740	Vitis aestivalis 'Norton ' mock inoculated at 8 h post inoculation	69
1.7	84.7	GSM147739	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	68
1.6	83.3	GSM147727	Vitis aestivalis 'Norton ' mock inoculated at 4 h post inoculation	56
1.6	83.3	GSM147742	Vitis aestivalis 'Norton ' mock inoculated at 24 h post inoculation	71
1.6	83.3	GSM436414	V. riparia (VR, PI588259) SD, 13h 3 days - rep3	GSE17502	Photoperiod regulation of grape bud dormancy

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Zea_mays

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