Co-expression analysis

Gene ID	1614812_s_at
Gene name	hypothetical protein LOC100265283
Homology with Arabidopsis	Similar to At3g02580: STE1 (STEROL 1) (HF=2e-27)
Module size	6 genes
NF	0.63
%ile	89.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.8	0.96	1614812_s_at	CF372270	hypothetical protein LOC100265283	-	2e-27	At3g02580	STE1 (STEROL 1)	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.95	1610957_at	CF207187	hypothetical protein LOC100241474	-	4e+0	At4g09320	NDPK1	O.I.	H.G.	S.X.	Please select
0.67	87.9	0.95	1608397_at	CB971352	hypothetical protein LOC100250547	-	4e+0	At3g26420	ATRZ-1A	O.I.	H.G.	S.X.	Please select
0.60	81.9	0.95	1622345_at	CB970837	hypothetical protein LOC100266705	-	3e-14	At1g73050	(R)-mandelonitrile lyase, putative / (R)-oxynitrilase, putative	O.I.	H.G.	S.X.	Please select
0.57	79.8	0.95	1606948_at	CF404230	hypothetical protein LOC100266705	-	2e-2	At1g74530	unknown protein	O.I.	H.G.	S.X.	Please select
0.30	39.4	0.95	1613602_at	CF513870	hypothetical LOC100254354	-	8e+0	At5g02470	DPA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
2.9	93.8	GSM147679	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	8
2.5	91.9	GSM147685	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	14
2.5	91.9	GSM147686	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	15
2.3	90.7	GSM147698	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	27
2.2	89.9	GSM147703	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 4 h post inoculation	32
2.1	89.1	GSM147697	Vitis vinifera 'Cabernet sauvignon' mock inoculateds at 4 h post inoculation	26
2.1	89.1	GSM147692	Vitis vinifera 'Cabernet sauvignon' mock inoculated at 8 h post inoculation	21
2.0	88.2	GSM147673	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 4 h post inoculation	2
2.0	88.2	GSM147674	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	3
2.0	88.2	GSM147680	Vitis vinifera 'Cabernet sauvignon' infected w/ powdery mildew (Erysiphe necator) conidiospores 8 h post inoculation	9

Inter-species module comparison

A co-expression module including the poplar gene, Ptp.1195.1.S1_at, orthologous to the query gene, 1614812_s_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	88.1	Ptp.1195.1.S1_at	At3g02580	-	-	9e-24	At3g02580	STE1 (STEROL 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.80	96.0	PtpAffx.58727.2.S1_at	At3g02580	hypothetical protein	-	6e-5	At5g63860	UVR8 (UVB-RESISTANCE 8)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.76	94.3	Ptp.2261.1.S1_at	At3g02580	hypothetical protein	-	1e-4	At2g23560	MES7 (METHYL ESTERASE 7)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.76	94.3	Ptp.6235.1.S1_at	At3g02580	-	-	1e-51	At5g42390	metalloendopeptidase	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.71	92.6	Ptp.291.1.S1_at	At3g02580	hypothetical protein	-	2e-6	At2g32560	F-box family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.69	91.5	Ptp.4399.1.S1_at	At3g02580	hypothetical protein	-	4e-3	At4g02340	epoxide hydrolase, putative	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.67	91.1	PtpAffx.78267.1.S1_s_at	At3g02580	hypothetical protein	-	1e-4	At4g02600	MLO1	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	Ptp.941.1.S1_at	At3g02580	-	-	2e-8	At3g24590	PLSP1 (plastidic type I signal peptidase 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.62	87.2	Ptp.6690.1.S1_at	At3g02580	histidine phosphotransfer protein	-	3e-11	At3g21510	AHP1 (HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.60	86.0	PtpAffx.4667.1.S1_a_at	At3g02580	hypothetical protein	-	8e-15	At5g06340	ATNUDX27 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 27)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.52	79.4	PtpAffx.8179.2.S1_at	At3g02580	-	-	1e-1	At2g36320	zinc finger (AN1-like) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Zea_mays

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