Co-expression analysis

Gene ID 1614807_s_at
Gene name
Homology with ArabidopsisSimilar to At1g50010: TUA2 (HF=3e-22)
Module size 9 genes
NF 0.20
%ile 29.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6787.90.941614807_s_atCF405955--3e-22At1g50010TUA2O.I.H.G.S.X.
0.5375.20.951622079_atCD801631hypothetical protein LOC100266760-1e-6At5g16390CAC1 (CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1)O.I.H.G.S.X.
0.3650.70.961615070_atCF373219hypothetical protein LOC100253300-4e-6At1g53645hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2022.40.951615151_atCF519025hypothetical protein LOC100247870-5e-12At2g18400ribosomal protein L6 family proteinO.I.H.G.S.X.
0.1718.20.961620146_atBQ792568--3e-1At1g63270ATNAP10O.I.H.G.S.X.
0.1616.70.951621603_atCB921057hypothetical protein LOC100264796-1e-3At5g27660catalytic/ protein binding / serine-type endopeptidase/ serine-type peptidaseO.I.H.G.S.X.
0.1515.60.951621821_s_atCD802160hypothetical protein LOC100267911-3e-1At4g29480mitochondrial ATP synthase g subunit family proteinO.I.H.G.S.X.
0.1414.40.951607461_atCD801250hypothetical protein LOC100242032-2e-1At1g62600flavin-containing monooxygenase family protein / FMO family proteinO.I.H.G.S.X.
0.1212.10.951620027_atCF214601similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein-6e-25At1g62390octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.996.6GSM287866Green hard berry B21 from plant 1 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.692.5GSM436355Seyval (SV, Seyve Villard 5-276) LD, 15h 14 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.491.3GSM436364Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436354Seyval (SV, Seyve Villard 5-276) LD, 15h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM287875Green hard berry C17 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM436365Seyval (SV, Seyve Villard 5-276) LD, 15h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436375Seyval (SV, Seyve Villard 5-276) SD, 13h 7 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM436351Seyval (SV, Seyve Villard 5-276) LD, 15h 3 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.189.1GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.189.1GSM436386Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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