Co-expression analysis

Gene ID 1614806_s_at
Gene name hypothetical protein LOC100264507
Homology with ArabidopsisSimilar to At2g25000: WRKY60 (HF=2e-4)
Module size 9 genes
NF 0.60
%ile 86.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.90.921614806_s_atCB343751hypothetical protein LOC100264507-2e-4At2g25000WRKY60O.I.H.G.S.X.
0.7088.60.941610064_atCB341653similar to DNA-binding protein-3e-19At2g38470WRKY33O.I.H.G.S.X.
0.6787.90.941616557_s_atCF204113.1hypothetical protein LOC100252599-3e-2At1g01490heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.6384.30.941614461_s_atCF204470.1hypothetical protein LOC100252599 /// hypothetical LOC100254334-3e-1At5g24770VSP2 (VEGETATIVE STORAGE PROTEIN 2)O.I.H.G.S.X.
0.5779.80.951609265_atCD800725hypothetical protein LOC100255460-5e-2At3g60530zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.5779.80.961622399_atCF206628.1similar to DNA-binding protein-2e-27At4g31550WRKY11O.I.H.G.S.X.
0.5679.40.951611285_s_atCA809190similar to DNA-binding protein-3e-22At4g31550WRKY11O.I.H.G.S.X.
0.5375.20.941609171_atCA813062hypothetical protein LOC100251782-2e-2At1g07530SCL14 (SCARECROW-LIKE 14)O.I.H.G.S.X.
0.3650.70.941611650_atCA808599hypothetical protein LOC100244122-3e-26At2g23320WRKY15O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.495.5GSM322367genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.395.2GSM322363genotype: Chardonnay - disease type: Bois Noir infected - rep3GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
3.294.9GSM322362genotype: Chardonnay - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM322368genotype: Incrocio Manzoni - disease type: Bois Noir infected - rep2GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.189.1GSM322361genotype: Chardonnay - disease type: Bois Noir infected - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
2.088.2GSM436394V. riparia (VR, PI588259) LD, 15h 7 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.088.2GSM436426V. riparia (VR, PI588259) SD, 13h 28 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM436403V. riparia (VR, PI588259) LD, 15h 28 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
1.987.2GSM322369genotype: Incrocio Manzoni - disease type: Healthy - rep1GSE12842Gene expression in grapevine in response to Bois noir infectionLink to GEO
1.987.2GSM436387Seyval (SV, Seyve Villard 5-276) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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