Co-expression analysis

Gene ID 1614789_at
Gene name hypothetical protein LOC100248834
Homology with ArabidopsisSimilar to At3g16150: L-asparaginase, putative / L-asparagine amidohydrolase, putative (HF=7e-9)
Module size 11 genes
NF 0.45
%ile 67.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5475.70.901614789_atBQ799243hypothetical protein LOC100248834-7e-9At3g16150L-asparaginase, putative / L-asparagine amidohydrolase, putativeO.I.H.G.S.X.
0.7088.60.941611719_atCB343041hypothetical protein LOC100267226-2e-3At5g44050MATE efflux family proteinO.I.H.G.S.X.
0.5779.80.941615128_atCB339351hypothetical protein LOC100253412-1e+0At3g45093-O.I.H.G.S.X.
0.5679.40.941607360_atCB342405hypothetical protein LOC100246988-2e-47At1g78510SPS1 (solanesyl diphosphate synthase 1)O.I.H.G.S.X.
0.4158.70.941615821_atCA818800hypothetical protein LOC100252905-1e-31At4g09350DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.4057.70.951609903_atCF516465hypothetical protein LOC100256148-4e+0At5g02200FHL (FAR-RED-ELONGATED HYPOCOTYL1-LIKE)O.I.H.G.S.X.
0.3954.90.941615141_atCB344835hypothetical protein LOC100247840-2e+0At3g01970WRKY45O.I.H.G.S.X.
0.3650.70.941610871_s_atCD716100hypothetical protein LOC100244516-0At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.3548.50.951619887_atCB976758hypothetical protein LOC100255748-4e-10At1g19740ATP-dependent protease La (LON) domain-containing proteinO.I.H.G.S.X.
0.3446.80.951607155_atCD718615hypothetical protein LOC100266884-2e-6At1g50020unknown proteinO.I.H.G.S.X.
0.3039.40.951609710_atBQ793963hypothetical protein LOC100252409-2e-12At1g22160senescence-associated protein-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.395.2GSM436429V. riparia (VR, PI588259) SD, 13h 42 days - rep3GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.692.5GSM287877Green hard berry B12 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.591.9GSM287896Pink soft berry C27 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.491.3GSM287885Green soft berry A22 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.390.7GSM287888Green soft berry C24 from plant 2 cluster distal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
2.289.9GSM436428V. riparia (VR, PI588259) SD, 13h 42 days - rep2GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM436427V. riparia (VR, PI588259) SD, 13h 42 days - rep1GSE17502Photoperiod regulation of grape bud dormancyLink to GEO
2.289.9GSM287902Red soft berry C30 from plant 2 cluster proximal position, biological rep 2GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287873Green hard berry B9 from plant 2 cluster proximal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO
1.987.2GSM287903Red soft berry A7 from plant 2 cluster distal position, biological rep 1GSE11406Expression data in individual grape berries during ripening initationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Zea_mays



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